RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 ZNF512BQ96KM6 892 aaPredicted RBP20.53■□□□□ 0.88
POLR2E-208ENST00000591709 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.53■□□□□ 0.889e-16■■■■□ 22.3
POLR2E-208ENST00000591709 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
POLR2E-208ENST00000591709 IGSF3O75054 1194 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 FLOT1O75955 427 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 FCER1AP12319 257 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 TAL1P17542 331 aaPredicted RBP20.52■□□□□ 0.88
POLR2E-208ENST00000591709 DSG3P32926 999 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 PBX2P40425 430 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 FAAP100Q0VG06 881 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 SLC44A5Q8NCS7 719 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 ATXN2LQ8WWM7 1075 aaKnown RBP20.52■□□□□ 0.88
POLR2E-208ENST00000591709 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
POLR2E-208ENST00000591709 PRDM12Q9H4Q4 367 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 DBNLQ9UJU6 430 aaKnown RBP20.52■□□□□ 0.88
POLR2E-208ENST00000591709 MYH7P12883 1935 aa20.52■□□□□ 0.88
POLR2E-208ENST00000591709 GRXCR1A8MXD5 290 aa20.51■□□□□ 0.87
POLR2E-208ENST00000591709 POLR3DP05423 398 aaPredicted RBP20.51■□□□□ 0.87
POLR2E-208ENST00000591709 CCDC129Q6ZRS4 1044 aa20.51■□□□□ 0.87
POLR2E-208ENST00000591709 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
POLR2E-208ENST00000591709 ASB2Q96Q27 587 aa20.51■□□□□ 0.87
POLR2E-208ENST00000591709 PBX4Q9BYU1 374 aa20.51■□□□□ 0.87
POLR2E-208ENST00000591709 CHD9Q3L8U1 2897 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 PGK2P07205 417 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 MS4A1P11836 297 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 GABPAQ06546 454 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 SPICE1Q8N0Z3 855 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 UHRF1Q96T88 793 aaPredicted RBP20.5■□□□□ 0.87
POLR2E-208ENST00000591709 MMP19Q99542 508 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 ANTXR1Q9H6X2 564 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 STARD7Q9NQZ5 370 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 NRBP1Q9UHY1 535 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 REV3LO60673 3130 aa20.5■□□□□ 0.87
POLR2E-208ENST00000591709 BDP1A6H8Y1 2624 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 ADAMTS4O75173 837 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 AKR1A1P14550 325 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 CCDC85BQ15834 202 aaPredicted RBP20.49■□□□□ 0.87
POLR2E-208ENST00000591709 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 ANKRD33Q7Z3H0 272 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 FAM122AQ96E09 287 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 TINF2Q9BSI4 451 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 CCDC8Q9H0W5 538 aaPredicted RBP20.49■□□□□ 0.87
POLR2E-208ENST00000591709 SYNRGQ9UMZ2 1314 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
POLR2E-208ENST00000591709 TIMP1P01033 207 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 ACLYP53396 1101 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 POLA2Q14181 598 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 TMEM132BQ14DG7 1078 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 TOX2Q96NM4 488 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 RIOK1Q9BRS2 568 aaKnown RBP20.48■□□□□ 0.87
POLR2E-208ENST00000591709 TBX21Q9UL17 535 aa20.48■□□□□ 0.87
POLR2E-208ENST00000591709 CHD7Q9P2D1 2997 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 SURF6O75683 361 aaKnown RBP20.47■□□□□ 0.87
POLR2E-208ENST00000591709 ZNF865P0CJ78 1059 aaPredicted RBP20.47■□□□□ 0.87
POLR2E-208ENST00000591709 MRPS5P82675 430 aaKnown RBP20.47■□□□□ 0.87
POLR2E-208ENST00000591709 ATP8B2P98198 1209 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 MAP3K12Q12852 859 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 ADGRE1Q14246 886 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 TMEM179Q6ZVK1 233 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 IL27Q8NEV9 243 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 MCM9Q9NXL9 1143 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
POLR2E-208ENST00000591709 SLC25A27O95847 323 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 PPIGQ13427 754 aaKnown RBP eCLIP20.46■□□□□ 0.87
POLR2E-208ENST00000591709 KCTD2Q14681 263 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 TMEM240Q5SV17 173 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 MFSD5Q6N075 450 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 NUP133Q8WUM0 1156 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 ARHGEF10LQ9HCE6 1279 aa20.46■□□□□ 0.87
POLR2E-208ENST00000591709 GREB1LQ9C091 1923 aaPredicted RBP20.45■□□□□ 0.86
POLR2E-208ENST00000591709 MAGEB6P1A0A0J9YX57 407 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 IGFBP4P22692 258 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 ICA1Q05084 483 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 ZNF792Q3KQV3 632 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 C16orf59Q7L2K0 433 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 TSEN34Q9BSV6 310 aaKnown RBP20.45■□□□□ 0.86
POLR2E-208ENST00000591709 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
POLR2E-208ENST00000591709 MYADML2A6NDP7 307 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 MOXD2PA6NHM9 499 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 APBB1O00213 710 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 WDR46O15213 610 aaKnown RBP20.44■□□□□ 0.86
POLR2E-208ENST00000591709 ACRP10323 421 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 CYP2D6P10635 497 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 CSF2RAP15509 400 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 KCNA10Q16322 511 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 RASIP1Q5U651 963 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 SSH3Q8TE77 659 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 SDR42E1Q8WUS8 393 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 EAF2Q96CJ1 260 aaPredicted RBP20.44■□□□□ 0.86
POLR2E-208ENST00000591709 NECAB3Q96P71 396 aaPredicted RBP20.44■□□□□ 0.86
POLR2E-208ENST00000591709 CRNKL1Q9BZJ0 848 aaKnown RBP20.44■□□□□ 0.86
POLR2E-208ENST00000591709 PPP1R12CQ9BZL4 782 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
POLR2E-208ENST00000591709 DIS3Q9Y2L1 958 aaKnown RBP20.44■□□□□ 0.86
POLR2E-208ENST00000591709 PRRC2BQ5JSZ5 2229 aaKnown RBP20.43■□□□□ 0.86
POLR2E-208ENST00000591709 AKR1B1P15121 316 aa20.43■□□□□ 0.86
POLR2E-208ENST00000591709 IRX5P78411 483 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms