RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 GORASP1Q9BQQ3 440 aa13.68□□□□□ -0.22
SMARCA4-217ENST00000591595 PALLDQ8WX93 1383 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 A0A1W2PQ27 194 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 A0A1W2PQ64 194 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 A0A1W2PQD8 194 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 FGAP02671 866 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 ZCWPW1Q9H0M4 648 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 LMO7Q8WWI1 1683 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-217ENST00000591595 YEATS4O95619 227 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 ZNF24P17028 368 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 ANO1Q5XXA6 986 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 CCDC12Q8WUD4 166 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 PFKFB1P16118 471 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 SYKP43405 635 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 CASP7P55210 303 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 PHC3Q8NDX5 983 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 ADORA1P30542 326 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 HSP90AA4PQ58FG1 418 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 MIPOL1Q8TD10 442 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
SMARCA4-217ENST00000591595 A0A1B0GVG6 124 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 GOLGA6L10A6NI86 522 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 BUB1BO60566 1050 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 CDC25CP30307 473 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 NLRP12P59046 1061 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 MPP3Q13368 585 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 RIPOR2Q9Y4F9 1068 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 TUBBP07437 444 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 UBASH3AP57075 661 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 FANCCQ00597 558 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 TMEM62Q0P6H9 643 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 NBPF14Q5TI25 921 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 MTRQ99707 1265 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 HPCAL4Q9UM19 191 aa13.65□□□□□ -0.22
SMARCA4-217ENST00000591595 B4DLN1 442 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 TUBB4BP68371 445 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 CUL3Q13618 768 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 CUL5Q93034 780 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 GPR108Q9NPR9 543 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 MYO1AQ9UBC5 1043 aa13.65□□□□□ -0.23
SMARCA4-217ENST00000591595 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 LINGO3P0C6S8 592 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 GGCXP38435 758 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 ZAP70P43403 619 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 TRIM29Q14134 588 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 TBC1D31Q96DN5 1066 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 MAPK8IP1Q9UQF2 711 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 SMIM24O75264 130 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 IFFO1Q0D2I5 559 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-217ENST00000591595 GPAA1O43292 621 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 IDH1O75874 414 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 ZFYP08048 801 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.238e-8■■□□□ 13.3
SMARCA4-217ENST00000591595 INF2Q27J81 1249 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 PDILTQ8N807 584 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 ZNF189O75820 626 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 GJA8P48165 433 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 STIM1Q13586 685 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 CCDC170Q8IYT3 715 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 PHKBQ93100 1093 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 CMA1P23946 247 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 DRP2Q13474 957 aa13.63□□□□□ -0.23
SMARCA4-217ENST00000591595 SCARF1Q14162 830 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms