RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 IFNL3Q8IZI9 196 aa27.5■■□□□ 1.99
LSM7-206ENST00000591515 PRKAG2Q9UGJ0 569 aa27.5■■□□□ 1.99
LSM7-206ENST00000591515 SWAP70Q9UH65 585 aa27.5■■□□□ 1.99
LSM7-206ENST00000591515 USP17L12C9JPN9 530 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 USP17L21D6R901 530 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 DNM1LO00429 736 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 SLC3A2P08195 630 aaKnown RBP27.49■■□□□ 1.99
LSM7-206ENST00000591515 USP17L2Q6R6M4 530 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 CCDC129Q6ZRS4 1044 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 ZNF287Q9HBT7 754 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 RABGAP1Q9Y3P9 1069 aa27.49■■□□□ 1.99
LSM7-206ENST00000591515 ZNF236Q9UL36 1845 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 MUC3AQ02505 3323 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 MSCO60682 206 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 CHMLP26374 656 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 CNGA1P29973 690 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 C12orf60Q5U649 245 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 TRPV1Q8NER1 839 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 MYLIPQ8WY64 445 aa27.48■■□□□ 1.99
LSM7-206ENST00000591515 TTYH1Q9H313 450 aaPredicted RBP27.48■■□□□ 1.99
LSM7-206ENST00000591515 SLC15A5A6NIM6 579 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 PTPREP23469 700 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 CTR9Q6PD62 1173 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 NPLOC4Q8TAT6 608 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 C12orf42Q96LP6 360 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 ATP11BQ9Y2G3 1177 aa27.47■■□□□ 1.99
LSM7-206ENST00000591515 PLCD1P51178 756 aa27.46■■□□□ 1.99
LSM7-206ENST00000591515 CCNA1P78396 465 aa27.46■■□□□ 1.99
LSM7-206ENST00000591515 WDR78Q5VTH9 848 aa27.46■■□□□ 1.99
LSM7-206ENST00000591515 SKAP1Q86WV1 359 aa27.46■■□□□ 1.99
LSM7-206ENST00000591515 MINDY4BA8MYZ0 360 aa27.45■■□□□ 1.98
LSM7-206ENST00000591515 HOXC6P09630 235 aa27.45■■□□□ 1.98
LSM7-206ENST00000591515 CYP2C19P33261 490 aa27.45■■□□□ 1.98
LSM7-206ENST00000591515 ALX1Q15699 326 aa27.45■■□□□ 1.98
LSM7-206ENST00000591515 ZYXQ15942 572 aaKnown RBP27.45■■□□□ 1.98
LSM7-206ENST00000591515 GJC2Q5T442 439 aaPredicted RBP27.45■■□□□ 1.98
LSM7-206ENST00000591515 ZMYM6O95789 1325 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 BAZ2AQ9UIF9 1905 aaKnown RBP27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L15C9J2P7 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L13C9JLJ4 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L11C9JVI0 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L18D6R9N7 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L22D6RA61 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L17D6RBQ6 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L19D6RCP7 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L20D6RJB6 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 IGHA2P01877 340 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 HSPD1P10809 573 aaKnown RBP27.44■■□□□ 1.98
LSM7-206ENST00000591515 ATP2B2Q01814 1243 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 USP17L24Q0WX57 530 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 GRB14Q14449 540 aa27.44■■□□□ 1.98
LSM7-206ENST00000591515 ZNF589Q86UQ0 364 aaPredicted RBP27.44■■□□□ 1.98
LSM7-206ENST00000591515 EPB41L4AQ9HCS5 686 aaPredicted RBP27.44■■□□□ 1.98
LSM7-206ENST00000591515 CDC45O75419 566 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 GH2P01242 217 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 CYP2D6P10635 497 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 CYBAP13498 195 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 GABPAQ06546 454 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 TATDN1Q6P1N9 297 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 CABP5Q9NP86 173 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 PRDM5Q9NQX1 630 aaPredicted RBP27.43■■□□□ 1.98
LSM7-206ENST00000591515 BTBD7Q9P203 1132 aa27.43■■□□□ 1.98
LSM7-206ENST00000591515 SMAD3P84022 425 aaKnown RBP27.42■■□□□ 1.98
LSM7-206ENST00000591515 CERKLQ49MI3 558 aaPredicted RBP27.42■■□□□ 1.98
LSM7-206ENST00000591515 SLC39A5Q6ZMH5 540 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 CATSPERGQ6ZRH7 1159 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 BADQ92934 168 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 FEZ1Q99689 392 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 DSCC1Q9BVC3 393 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 CTNNA3Q9UI47 895 aa27.42■■□□□ 1.98
LSM7-206ENST00000591515 SMCHD1A6NHR9 2005 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 PDE4BQ07343 736 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 C16orf86Q6ZW13 317 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 CCDC17Q96LX7 622 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 PDLIM7Q9NR12 457 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 IVNS1ABPQ9Y6Y0 642 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 A0A0G2JMZ2 1700 aa27.41■■□□□ 1.98
LSM7-206ENST00000591515 ROBO3Q96MS0 1386 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 ZNFX1Q9P2E3 1918 aaKnown RBP27.4■■□□□ 1.98
LSM7-206ENST00000591515 FOSL2P15408 326 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 VCAM1P19320 739 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 SNX17Q15036 470 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 TRIM60Q495X7 471 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 VPS53Q5VIR6 699 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 LBX2Q6XYB7 198 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 MKNK2Q9HBH9 465 aa27.4■■□□□ 1.98
LSM7-206ENST00000591515 CYP2D7A0A087X1C5 515 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 SPDYE16A6NNV3 312 aaPredicted RBP27.39■■□□□ 1.98
LSM7-206ENST00000591515 SGSM2O43147 1006 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 PPARAQ07869 468 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 ABCB5Q2M3G0 1257 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 ANO1Q5XXA6 986 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 ARRDC4Q8NCT1 418 aa27.39■■□□□ 1.98
LSM7-206ENST00000591515 KBTBD13C9JR72 458 aa27.38■■□□□ 1.97
LSM7-206ENST00000591515 FGAP02671 866 aa27.38■■□□□ 1.97
LSM7-206ENST00000591515 SHMT1P34896 483 aa27.38■■□□□ 1.97
LSM7-206ENST00000591515 CDK8P49336 464 aa27.38■■□□□ 1.97
LSM7-206ENST00000591515 SH3RF1Q7Z6J0 888 aa27.38■■□□□ 1.97
LSM7-206ENST00000591515 DYNLL2Q96FJ2 89 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms