RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 GOLGA8HP0CJ92 632 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 PDHBP11177 359 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 BMP3P12645 472 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 AK2P54819 239 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 RABEP1Q15276 862 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 CCDC144CPQ8IYA2 1237 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 GPCPD1Q9NPB8 672 aa21.45■■□□□ 1.02
CROCCP3-205ENST00000591316 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 SGMS1Q86VZ5 419 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 MYH4Q9Y623 1939 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L15C9J2P7 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L13C9JLJ4 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 TMEM232C9JQI7 657 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L11C9JVI0 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L18D6R9N7 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L22D6RA61 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L17D6RBQ6 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L19D6RCP7 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L20D6RJB6 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 USP17L24Q0WX57 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 TROAPQ12815 778 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 IKQ13123 557 aaPredicted RBP21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 ANKRD23Q86SG2 305 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 GMCL1Q96IK5 515 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 AGXT2Q9BYV1 514 aa21.44■■□□□ 1.02
CROCCP3-205ENST00000591316 OSBPP22059 807 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 PABPC4Q13310 644 aaKnown RBP eCLIP21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 TTBK2Q6IQ55 1244 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 CATSPERGQ6ZRH7 1159 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 FBXL16Q8N461 479 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 DCAF4Q8WV16 495 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 FBXO28Q9NVF7 368 aa21.43■■□□□ 1.02
CROCCP3-205ENST00000591316 ZBTB43O43298 467 aa21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 FLOT1O75955 427 aa21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 PARP1P09874 1014 aaKnown RBP21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 CYP2C8P10632 490 aa21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 HOXA7P31268 230 aaPredicted RBP21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 IRX3P78415 501 aaPredicted RBP21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 APOA5Q6Q788 366 aa21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 REM2Q8IYK8 340 aaPredicted RBP21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 STAG2Q8N3U4 1231 aa21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 ALDH8A1Q9H2A2 487 aaPredicted RBP21.42■■□□□ 1.02
CROCCP3-205ENST00000591316 SNHG28P0DPA3 235 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 SLC16A2P36021 539 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 ZNF543Q08ER8 600 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 STK3Q13188 491 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 ANKRD1Q15327 319 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 P2RX7Q99572 595 aaKnown RBP21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 UBA5Q9GZZ9 404 aa21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 ASCC2Q9H1I8 757 aaPredicted RBP21.41■■□□□ 1.02
CROCCP3-205ENST00000591316 DDAH1O94760 285 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 COG2Q14746 738 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 FANCBQ8NB91 859 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 KIFC2Q96AC6 838 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CPVLQ9H3G5 476 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 TPCN1Q9ULQ1 816 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 ST18O60284 1047 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CALM1P0DP23 149 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CALM2P0DP24 149 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CALM3P0DP25 149 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 PDIA3P30101 505 aaKnown RBP21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CCT2P78371 535 aaKnown RBP21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 TAF1CQ15572 869 aaPredicted RBP21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 CTCFLQ8NI51 663 aaPredicted RBP21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 MAD2L2Q9UI95 211 aa21.4■■□□□ 1.02
CROCCP3-205ENST00000591316 GOLGA8AA7E2F4 631 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 TRPA1O75762 1119 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 STAT2P52630 851 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 GRM4Q14833 912 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 GPATCH4Q5T3I0 446 aaKnown RBP21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 CMTR1Q8N1G2 835 aaKnown RBP21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 CCDC82Q8N4S0 544 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 SMCR8Q8TEV9 937 aaPredicted RBP21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 CHURC1Q8WUH1 139 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 HOXC10Q9NYD6 342 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 FEM1BQ9UK73 627 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
CROCCP3-205ENST00000591316 PTPRFP10586 1907 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 PALM3A6NDB9 673 aaPredicted RBP21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 KLRF2D3W0D1 207 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 METAP2P50579 478 aaKnown RBP eCLIP21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 ASPRV1Q53RT3 343 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 SLF1Q9BQI6 1058 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 SLC45A1Q9Y2W3 748 aa21.38■■□□□ 1.01
CROCCP3-205ENST00000591316 PCNTO95613 3336 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 DHX16O60231 1041 aaKnown RBP21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 ALDH1A1P00352 501 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 DSG3P32926 999 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 KIF5BP33176 963 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 EVCP57679 992 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 SNAP25P60880 206 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 RTN1Q16799 776 aa21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 PRPF38AQ8NAV1 312 aaKnown RBP21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 ZNF274Q96GC6 653 aaPredicted RBP21.37■■□□□ 1.01
CROCCP3-205ENST00000591316 ZFYVE28Q9HCC9 887 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms