RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 MYO1BO43795 1136 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 PRDX5P30044 214 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 LONRF2Q1L5Z9 754 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 TTC38Q5R3I4 469 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 KANK3Q6NY19 840 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 APTXQ7Z2E3 356 aaKnown RBP21.71■■□□□ 1.07
MBD3-207ENST00000590550 LZTFL1Q9NQ48 299 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 RNF216Q9NWF9 866 aaPredicted RBP21.71■■□□□ 1.07
MBD3-207ENST00000590550 PLCH1Q4KWH8 1693 aa21.71■■□□□ 1.07
MBD3-207ENST00000590550 MCM7P33993 719 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 RCAN1P53805 252 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 MECOMQ03112 1051 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 TMTC3Q6ZXV5 915 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 GPR161Q8N6U8 529 aaKnown RBP21.7■■□□□ 1.07
MBD3-207ENST00000590550 TRIML1Q8N9V2 468 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 MTA3Q9BTC8 594 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 PSD3Q9NYI0 1048 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 MTMR7Q9Y216 660 aa21.7■■□□□ 1.07
MBD3-207ENST00000590550 PHLPP1O60346 1717 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 STX10O60499 249 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 IVLP07476 585 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 CCT6AP40227 531 aaKnown RBP21.7■■□□□ 1.06
MBD3-207ENST00000590550 RBL2Q08999 1139 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 MAPK8IP1Q9UQF2 711 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 A0A1B0GTH6 734 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 PPP2R3AQ06190 1150 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 CUL4BQ13620 913 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 CACNA1SQ13698 1873 aa21.7■■□□□ 1.06
MBD3-207ENST00000590550 N4BP1O75113 896 aaKnown RBP21.69■■□□□ 1.06
MBD3-207ENST00000590550 IGSF22Q8N9C0 903 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 IQUBQ8NA54 791 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 TNFRSF25Q93038 417 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 CTNND2Q9UQB3 1225 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 CNTNAP5Q8WYK1 1306 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 DUOX1Q9NRD9 1551 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 ERCC5P28715 1186 aaPredicted RBP21.69■■□□□ 1.06
MBD3-207ENST00000590550 UBE4AQ14139 1066 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 NSUN4Q96CB9 384 aaKnown RBP21.69■■□□□ 1.06
MBD3-207ENST00000590550 BRIP1Q9BX63 1249 aa21.69■■□□□ 1.06
MBD3-207ENST00000590550 BSDC1Q9NW68 430 aaPredicted RBP21.69■■□□□ 1.06
MBD3-207ENST00000590550 NLRP5P59047 1200 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 IL17AQ16552 155 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 SH3RF1Q7Z6J0 888 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
MBD3-207ENST00000590550 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
MBD3-207ENST00000590550 PPP1R3GB7ZBB8 358 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 CT47A1Q5JQC4 288 aaPredicted RBP21.68■■□□□ 1.06
MBD3-207ENST00000590550 SPATA1Q5VX52 437 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 RAD9BQ6WBX8 426 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 FCHSD1Q86WN1 690 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 RASGRP4Q8TDF6 673 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 DCP1AQ9NPI6 582 aaPredicted RBP21.68■■□□□ 1.06
MBD3-207ENST00000590550 XDHP47989 1333 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 MYH13Q9UKX3 1938 aa21.68■■□□□ 1.06
MBD3-207ENST00000590550 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
MBD3-207ENST00000590550 AKR1B15C9JRZ8 316 aaPredicted RBP21.67■■□□□ 1.06
MBD3-207ENST00000590550 TUBB4AP04350 444 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 TXNRD3Q86VQ6 643 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 CTCFLQ8NI51 663 aaPredicted RBP21.67■■□□□ 1.06
MBD3-207ENST00000590550 GPKOWQ92917 476 aaPredicted RBP eCLIP21.67■■□□□ 1.06
MBD3-207ENST00000590550 MTRQ99707 1265 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 PHACTR2O75167 634 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
MBD3-207ENST00000590550 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
MBD3-207ENST00000590550 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
MBD3-207ENST00000590550 FAN1Q9Y2M0 1017 aa21.66■■□□□ 1.06
MBD3-207ENST00000590550 CASP14P31944 242 aa21.66■■□□□ 1.06
MBD3-207ENST00000590550 KIFC2Q96AC6 838 aa21.66■■□□□ 1.06
MBD3-207ENST00000590550 ADD3Q9UEY8 706 aaKnown RBP21.66■■□□□ 1.06
MBD3-207ENST00000590550 PPP2R5BQ15173 497 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 WWC2Q6AWC2 1192 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 CCDC12Q8WUD4 166 aaPredicted RBP21.65■■□□□ 1.06
MBD3-207ENST00000590550 FERMT2Q96AC1 680 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 TSPY2A6NKD2 308 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 USP17L8P0C7I0 530 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 ATP2C1P98194 919 aaPredicted RBP21.65■■□□□ 1.06
MBD3-207ENST00000590550 PPFIBP1Q86W92 1011 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 PPM1EQ8WY54 764 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 SRP68Q9UHB9 627 aaKnown RBP21.65■■□□□ 1.06
MBD3-207ENST00000590550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■■□□□ 11.4
MBD3-207ENST00000590550 COL16A1Q07092 1604 aaPredicted RBP21.65■■□□□ 1.06
MBD3-207ENST00000590550 TFRCP02786 760 aaKnown RBP21.65■■□□□ 1.06
MBD3-207ENST00000590550 FXR1P51114 621 aaKnown RBP eCLIP21.65■■□□□ 1.06
MBD3-207ENST00000590550 RRAGBQ5VZM2 374 aa21.65■■□□□ 1.06
MBD3-207ENST00000590550 ABL1P00519 1130 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 SCG2P13521 617 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
MBD3-207ENST00000590550 CDKAL1Q5VV42 579 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 VPS16Q9H269 839 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 SUGCTQ9HAC7 445 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 MAP3K9P80192 1104 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 GSDMAQ96QA5 445 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 PLIN2Q99541 437 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 MCM9Q9NXL9 1143 aa21.64■■□□□ 1.05
MBD3-207ENST00000590550 FAM205AQ6ZU69 1335 aa21.63■■□□□ 1.05
MBD3-207ENST00000590550 RNF225M0QZC1 329 aaPredicted RBP21.63■■□□□ 1.05
MBD3-207ENST00000590550 DDAH1O94760 285 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms