RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SLC25A27O95847 323 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 IGHA2P01877 340 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 FCER1AP12319 257 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 GNAT2P19087 354 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 TMEM132BQ14DG7 1078 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 STK11IPQ8N1F8 1099 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 TRPV1Q8NER1 839 aa21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 SENP6Q9GZR1 1112 aaPredicted RBP21.47■■□□□ 1.03
PRKCSH-211ENST00000590098 COBLO75128 1261 aa21.46■■□□□ 1.03
PRKCSH-211ENST00000590098 APPP05067 770 aa21.46■■□□□ 1.03
PRKCSH-211ENST00000590098 CYBAP13498 195 aa21.46■■□□□ 1.03
PRKCSH-211ENST00000590098 LRRC26Q2I0M4 334 aa21.46■■□□□ 1.03
PRKCSH-211ENST00000590098 FBXO28Q9NVF7 368 aa21.46■■□□□ 1.03
PRKCSH-211ENST00000590098 ERC2O15083 957 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 GPAA1O43292 621 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 MAGEA10P43363 369 aaPredicted RBP21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 TDO2P48775 406 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 FAM83BQ5T0W9 1011 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 ZNF287Q9HBT7 754 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 PPP1R9AQ9ULJ8 1098 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 ADAMTS5Q9UNA0 930 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 TTC41PQ6P2S7 1318 aa21.45■■□□□ 1.02
PRKCSH-211ENST00000590098 DNM1LO00429 736 aa21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 RASA1P20936 1047 aa21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 ZNF444Q8N0Y2 327 aaPredicted RBP21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 ARRDC4Q8NCT1 418 aa21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 MMP19Q99542 508 aa21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 GREB1LQ9C091 1923 aaPredicted RBP21.44■■□□□ 1.02
PRKCSH-211ENST00000590098 VWA5AO00534 786 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 STAT3P40763 770 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 MAML3Q96JK9 1138 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 UBE2OQ9C0C9 1292 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 NYAP2Q9P242 653 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 ROBO3Q96MS0 1386 aa21.43■■□□□ 1.02
PRKCSH-211ENST00000590098 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 M0R2C6 588 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 SEPT4O43236 478 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 COPB2P35606 906 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 KCTD2Q14681 263 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 RIOX2Q8IUF8 465 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 NACAP1Q9BZK3 213 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 MYH4Q9Y623 1939 aa21.42■■□□□ 1.02
PRKCSH-211ENST00000590098 PLXNA1Q9UIW2 1896 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 F5H6K3 240 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 ATN1P54259 1190 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 KLRC3Q07444 240 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 PRAMEF19Q5SWL8 479 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 GJC2Q5T442 439 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 ANO1Q5XXA6 986 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 TDHQ8IZJ6 230 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 NUP88Q99567 741 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 CLIP2Q9UDT6 1046 aa21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 ZBTB47Q9UFB7 747 aaPredicted RBP21.41■■□□□ 1.02
PRKCSH-211ENST00000590098 MYCNP04198 464 aaPredicted RBP21.4■■□□□ 1.02
PRKCSH-211ENST00000590098 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
PRKCSH-211ENST00000590098 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
PRKCSH-211ENST00000590098 ZNF214Q9UL59 606 aaPredicted RBP21.4■■□□□ 1.02
PRKCSH-211ENST00000590098 PRDM1O75626 825 aa21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 NDUFB10O96000 172 aa21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 PGK2P07205 417 aa21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 PRPF38AQ8NAV1 312 aaKnown RBP21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 PI4K2BQ8TCG2 481 aa21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 DIS3Q9Y2L1 958 aaKnown RBP21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 CTDP1Q9Y5B0 961 aaPredicted RBP21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.01
PRKCSH-211ENST00000590098 SLC3A2P08195 630 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 MX1P20591 662 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 PDE4BQ07343 736 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 REPS2Q8NFH8 660 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 SEC62Q99442 399 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 LBHD1Q9BQE6 289 aaPredicted RBP21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 TINF2Q9BSI4 451 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 PRKAG2Q9UGJ0 569 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 NRBP1Q9UHY1 535 aa21.38■■□□□ 1.01
PRKCSH-211ENST00000590098 IGKV6D-41A0A0C4DH26 115 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 ZBED4O75132 1171 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 LRIT3Q3SXY7 679 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 SNRNP48Q6IEG0 339 aaKnown RBP21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 OTUD7AQ8TE49 926 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 MKL1Q969V6 931 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 CEP95Q96GE4 821 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 NAPBQ9H115 298 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 MTMR4Q9NYA4 1195 aa21.37■■□□□ 1.01
PRKCSH-211ENST00000590098 TTLL1O95922 423 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 RARBP10826 455 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 SLC4A3P48751 1232 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 RTP1P59025 263 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 ZNF792Q3KQV3 632 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 ZMYM1Q5SVZ6 1142 aa21.36■■□□□ 1.01
PRKCSH-211ENST00000590098 GPR153Q6NV75 609 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms