RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
SAFB2-205ENST00000590000 BADQ92934 168 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 TTYH1Q9H313 450 aaPredicted RBP17.1■□□□□ 0.33
SAFB2-205ENST00000590000 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
SAFB2-205ENST00000590000 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 TTC28Q96AY4 2481 aa17.1■□□□□ 0.33
SAFB2-205ENST00000590000 PGK2P07205 417 aa17.09■□□□□ 0.33
SAFB2-205ENST00000590000 CDK8P49336 464 aa17.09■□□□□ 0.33
SAFB2-205ENST00000590000 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
SAFB2-205ENST00000590000 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
SAFB2-205ENST00000590000 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
SAFB2-205ENST00000590000 ERC1Q8IUD2 1116 aa17.09■□□□□ 0.33
SAFB2-205ENST00000590000 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
SAFB2-205ENST00000590000 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 USP17L21D6R901 530 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 STRNO43815 780 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 FLOT1O75955 427 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 ICA1Q05084 483 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 PLS1Q14651 629 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.32
SAFB2-205ENST00000590000 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
SAFB2-205ENST00000590000 NCAPG2Q86XI2 1143 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
SAFB2-205ENST00000590000 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
SAFB2-205ENST00000590000 ZNF865P0CJ78 1059 aaPredicted RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 TLE2Q04725 743 aa17.07■□□□□ 0.32
SAFB2-205ENST00000590000 TTF1Q15361 905 aaPredicted RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
SAFB2-205ENST00000590000 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 CDX2Q99626 313 aaPredicted RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
SAFB2-205ENST00000590000 MCM3APO60318 1980 aa17.07■□□□□ 0.32
SAFB2-205ENST00000590000 HMMRO75330 724 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 PGK1P00558 417 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
SAFB2-205ENST00000590000 C16orf86Q6ZW13 317 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 ARRDC4Q8NCT1 418 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 NUP88Q99567 741 aaPredicted RBP17.06■□□□□ 0.32
SAFB2-205ENST00000590000 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
SAFB2-205ENST00000590000 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 MROH8Q9H579 483 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
SAFB2-205ENST00000590000 WDR46O15213 610 aaKnown RBP17.05■□□□□ 0.32
SAFB2-205ENST00000590000 ADCY6O43306 1168 aa17.05■□□□□ 0.32
SAFB2-205ENST00000590000 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
SAFB2-205ENST00000590000 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
SAFB2-205ENST00000590000 SWAP70Q9UH65 585 aa17.05■□□□□ 0.32
SAFB2-205ENST00000590000 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
SAFB2-205ENST00000590000 MYADML2A6NDP7 307 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 ATP5JP18859 108 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
SAFB2-205ENST00000590000 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 FGD4Q96M96 766 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 HAUS7Q99871 368 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 ATP8A2Q9NTI2 1148 aa17.04■□□□□ 0.32
SAFB2-205ENST00000590000 VWA5AO00534 786 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
SAFB2-205ENST00000590000 FCER1AP12319 257 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 MMP19Q99542 508 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 TINF2Q9BSI4 451 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 ARHGEF10LQ9HCE6 1279 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 CHD9Q3L8U1 2897 aa17.03■□□□□ 0.32
SAFB2-205ENST00000590000 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
SAFB2-205ENST00000590000 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
SAFB2-205ENST00000590000 IFIT2P09913 472 aaKnown RBP17.02■□□□□ 0.32
SAFB2-205ENST00000590000 ZNF697Q5TEC3 545 aa17.02■□□□□ 0.32
SAFB2-205ENST00000590000 CCDC17Q96LX7 622 aa17.02■□□□□ 0.32
SAFB2-205ENST00000590000 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
SAFB2-205ENST00000590000 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
SAFB2-205ENST00000590000 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 RAB11FIP3O75154 756 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 RASA1P20936 1047 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 STAT3P40763 770 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 CCSAPQ6IQ19 270 aaPredicted RBP17.01■□□□□ 0.31
SAFB2-205ENST00000590000 STK11IPQ8N1F8 1099 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 PRKAG2Q9UGJ0 569 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
SAFB2-205ENST00000590000 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
SAFB2-205ENST00000590000 KIAA0355O15063 1070 aa17■□□□□ 0.31
SAFB2-205ENST00000590000 SLC25A27O95847 323 aa17■□□□□ 0.31
SAFB2-205ENST00000590000 USP38Q8NB14 1042 aa17■□□□□ 0.31
SAFB2-205ENST00000590000 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
SAFB2-205ENST00000590000 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
SAFB2-205ENST00000590000 MUC3AQ02505 3323 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms