RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 USP17L19D6RCP7 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L20D6RJB6 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 PSMA5P28066 241 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 FGD1P98174 961 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 USP17L24Q0WX57 530 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 SEC23AQ15436 765 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 ASCC2Q9H1I8 757 aaPredicted RBP26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 GPHNQ9NQX3 736 aaPredicted RBP26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 SLC45A1Q9Y2W3 748 aa26.32■■□□□ 1.8
R3HDM4-205ENST00000589445 SH2B2O14492 632 aaPredicted RBP26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 TBC1D8O95759 1140 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 SLC1A4P43007 532 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 NFXL1Q6ZNB6 911 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 DHX32Q7L7V1 743 aaKnown RBP26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 TMEM87BQ96K49 555 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 ZFYVE28Q9HCC9 887 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 SAGE1Q9NXZ1 904 aa26.31■■□□□ 1.8
R3HDM4-205ENST00000589445 CA12O43570 354 aa26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 FLOT1O75955 427 aa26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 IKQ13123 557 aaPredicted RBP26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 UPF3BQ9BZI7 483 aaKnown RBP26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 LY9Q9HBG7 655 aa26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 SENP2Q9HC62 589 aa26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 FRMPD2Q68DX3 1309 aaPredicted RBP26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 WDR19Q8NEZ3 1342 aa26.3■■□□□ 1.8
R3HDM4-205ENST00000589445 RPS6KB1P23443 525 aa26.29■■□□□ 1.8
R3HDM4-205ENST00000589445 ANAPC15P60006 121 aa26.29■■□□□ 1.8
R3HDM4-205ENST00000589445 DCAF4Q8WV16 495 aa26.29■■□□□ 1.8
R3HDM4-205ENST00000589445 GMCL1Q96IK5 515 aa26.29■■□□□ 1.8
R3HDM4-205ENST00000589445 CCDC69A6NI79 296 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 BMP3P12645 472 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 HOXA7P31268 230 aaPredicted RBP26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 KCTD1Q719H9 257 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 C22orf23Q9BZE7 217 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 CYP46A1Q9Y6A2 500 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 ZSWIM8A7E2V4 1837 aa26.28■■□□□ 1.8
R3HDM4-205ENST00000589445 PDHBP11177 359 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 HERVK_113P62684 666 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 CATSPERGQ6ZRH7 1159 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 IGDCC4Q8TDY8 1250 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 ANKS1AQ92625 1134 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 BACH2Q9BYV9 841 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 FBXO28Q9NVF7 368 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 CPA4Q9UI42 421 aa26.27■■□□□ 1.8
R3HDM4-205ENST00000589445 RUFY3Q7L099 469 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 CATIPQ7Z7H3 387 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 MTA3Q9BTC8 594 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 MCOLN1Q9GZU1 580 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 R3HDMLQ9H3Y0 253 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 GPCPD1Q9NPB8 672 aa26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 NAP1L2Q9ULW6 460 aaPredicted RBP26.26■■□□□ 1.79
R3HDM4-205ENST00000589445 ADGRA2Q96PE1 1338 aa26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 EXOSC10Q01780 885 aaKnown RBP26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 ZNF654Q8IZM8 581 aa26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 PAGR1Q9BTK6 254 aa26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 MYL10Q9BUA6 226 aa26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 TM6SF1Q9BZW5 370 aa26.25■■□□□ 1.79
R3HDM4-205ENST00000589445 MYH6P13533 1939 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 MGAMO43451 1857 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 SPDYE16A6NNV3 312 aaPredicted RBP26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 TMEM232C9JQI7 657 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 STAT2P52630 851 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 Q6ZUG5 572 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 RAB11FIP4Q86YS3 637 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 NUP133Q8WUM0 1156 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 KIFC2Q96AC6 838 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 P2RX7Q99572 595 aaKnown RBP26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 SLF1Q9BQI6 1058 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 ZSWIM6Q9HCJ5 1215 aa26.24■■□□□ 1.79
R3HDM4-205ENST00000589445 TLR2O60603 784 aa26.23■■□□□ 1.79
R3HDM4-205ENST00000589445 GOLGA8HP0CJ92 632 aa26.23■■□□□ 1.79
R3HDM4-205ENST00000589445 ANKRD13CQ8N6S4 541 aa26.23■■□□□ 1.79
R3HDM4-205ENST00000589445 ATG4CQ96DT6 458 aa26.23■■□□□ 1.79
R3HDM4-205ENST00000589445 FEM1BQ9UK73 627 aa26.23■■□□□ 1.79
R3HDM4-205ENST00000589445 PARP1P09874 1014 aaKnown RBP26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 LIFRP42702 1097 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 ZNF543Q08ER8 600 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 COG2Q14746 738 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 MICU3Q86XE3 530 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 BRF1Q92994 677 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 CFHR5Q9BXR6 569 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 PPP1R9AQ9ULJ8 1098 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 SLC12A7Q9Y666 1083 aa26.22■■□□□ 1.79
R3HDM4-205ENST00000589445 KLF18A0A0U1RQI7 1052 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 DDAH1O94760 285 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 ECM2O94769 699 aaPredicted RBP26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 RXRAP19793 462 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 GCLCP48506 637 aaPredicted RBP26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 ASPRV1Q53RT3 343 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 CCDC144CPQ8IYA2 1237 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 TMTC2Q8N394 836 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 GTF3C2Q8WUA4 911 aaPredicted RBP26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 PDRG1Q9NUG6 133 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 CTDP1Q9Y5B0 961 aaPredicted RBP26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 PDE4DIPQ5VU43 2346 aa26.21■■□□□ 1.79
R3HDM4-205ENST00000589445 MYPNQ86TC9 1320 aa26.2■■□□□ 1.79
R3HDM4-205ENST00000589445 PEX10O60683 326 aa26.2■■□□□ 1.78
R3HDM4-205ENST00000589445 SNHG28P0DPA3 235 aa26.2■■□□□ 1.78
R3HDM4-205ENST00000589445 DSG3P32926 999 aa26.2■■□□□ 1.78
R3HDM4-205ENST00000589445 SLC16A2P36021 539 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms