RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 RBPJLQ9UBG7 517 aa12.61□□□□□ -0.39
CLPTM1-211ENST00000589347 MYH6P13533 1939 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 RASA1P20936 1047 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 NUCB1Q02818 461 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 PPARAQ07869 468 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 RPTORQ8N122 1335 aa12.6□□□□□ -0.39
CLPTM1-211ENST00000589347 HIP1O00291 1037 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 CYP2B6P20813 491 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 DSG3P32926 999 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 SPICE1Q8N0Z3 855 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 DIS3LQ8TF46 1054 aaKnown RBP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 DEFB118Q96PH6 123 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 PORCNQ9H237 461 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
CLPTM1-211ENST00000589347 SLC15A5A6NIM6 579 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 CNMDO75829 334 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 COPB2P35606 906 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 MAGEA10P43363 369 aaPredicted RBP12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 PLS1Q14651 629 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 C7orf61Q8IZ16 206 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 ANKLE1Q8NAG6 615 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 SHCBP1Q8NEM2 672 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 GUCD1Q96NT3 240 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 SLC5A4Q9NY91 659 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 BTBD7Q9P203 1132 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 GJD2Q9UKL4 321 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 CCDC171Q6TFL3 1326 aa12.58□□□□□ -0.4
CLPTM1-211ENST00000589347 SMIM22K7EJ46 135 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 PRDM1O75626 825 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 TTLL1O95922 423 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 Q3C1V9 767 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 MORN1Q5T089 497 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 TRIB2Q92519 343 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 SPATC1LQ9H0A9 340 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 MROH8Q9H579 483 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 MCM3APO60318 1980 aa12.57□□□□□ -0.4
CLPTM1-211ENST00000589347 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 TSPY2A6NKD2 308 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 STRNO43815 780 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 PEX10O60683 326 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 SLC25A27O95847 323 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 IGHDP01880 384 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 PTPREP23469 700 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 GRB14Q14449 540 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 MFSD14CQ5VZR4 134 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 NCAPG2Q86XI2 1143 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 ATG4CQ96DT6 458 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 SLF1Q9BQI6 1058 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 MOV10L1Q9BXT6 1211 aaKnown RBP12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
CLPTM1-211ENST00000589347 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 ALX1Q15699 326 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 GMCL1P1Q8NEA9 526 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 FAM227BQ96M60 508 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
CLPTM1-211ENST00000589347 F5H6K3 240 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 NDUFB10O96000 172 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 SYN1P17600 705 aa12.54□□□□□ -0.4
CLPTM1-211ENST00000589347 ERCC3P19447 782 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms