RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PNMA1Q8ND90 353 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 ZNF296Q8WUU4 475 aaPredicted RBP22.93■■□□□ 1.26
CIRBP-220ENST00000588917 GMCL1Q96IK5 515 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 ZFYVE28Q9HCC9 887 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 HOXC10Q9NYD6 342 aa22.93■■□□□ 1.26
CIRBP-220ENST00000588917 NDUFB10O96000 172 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 BMP3P12645 472 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 SLC1A4P43007 532 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 RBM25P49756 843 aaKnown RBP22.92■■□□□ 1.26
CIRBP-220ENST00000588917 IRX3P78415 501 aaPredicted RBP22.92■■□□□ 1.26
CIRBP-220ENST00000588917 NOM1Q5C9Z4 860 aaKnown RBP22.92■■□□□ 1.26
CIRBP-220ENST00000588917 TREML2Q5T2D2 321 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 SPICE1Q8N0Z3 855 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 FBXL16Q8N461 479 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 IL27Q8NEV9 243 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 DCAF4Q8WV16 495 aa22.92■■□□□ 1.26
CIRBP-220ENST00000588917 PARK7Q99497 189 aaKnown RBP22.92■■□□□ 1.26
CIRBP-220ENST00000588917 RPAP3Q9H6T3 665 aaPredicted RBP22.92■■□□□ 1.26
CIRBP-220ENST00000588917 CCDC69A6NI79 296 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 COG2Q14746 738 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 TAF1CQ15572 869 aaPredicted RBP22.91■■□□□ 1.26
CIRBP-220ENST00000588917 SYNE3Q6ZMZ3 975 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 NFXL1Q6ZNB6 911 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 CATIPQ7Z7H3 387 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 CFHR5Q9BXR6 569 aa22.91■■□□□ 1.26
CIRBP-220ENST00000588917 GPR25O00155 361 aa22.9■■□□□ 1.26
CIRBP-220ENST00000588917 SH2B2O14492 632 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-220ENST00000588917 SOX10P56693 466 aa22.9■■□□□ 1.26
CIRBP-220ENST00000588917 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-220ENST00000588917 CHURC1Q8WUH1 139 aa22.9■■□□□ 1.26
CIRBP-220ENST00000588917 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
CIRBP-220ENST00000588917 LY9Q9HBG7 655 aa22.9■■□□□ 1.26
CIRBP-220ENST00000588917 CALM1P0DP23 149 aa22.89■■□□□ 1.25
CIRBP-220ENST00000588917 CALM2P0DP24 149 aa22.89■■□□□ 1.25
CIRBP-220ENST00000588917 CALM3P0DP25 149 aa22.89■■□□□ 1.25
CIRBP-220ENST00000588917 KIAA1755Q5JYT7 1200 aa22.89■■□□□ 1.25
CIRBP-220ENST00000588917 GPATCH4Q5T3I0 446 aaKnown RBP22.89■■□□□ 1.25
CIRBP-220ENST00000588917 ASCC2Q9H1I8 757 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-220ENST00000588917 FEM1BQ9UK73 627 aa22.89■■□□□ 1.25
CIRBP-220ENST00000588917 MYPNQ86TC9 1320 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 PLA2G6O60733 806 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 GCLCP48506 637 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-220ENST00000588917 FAM83BQ5T0W9 1011 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 Q6ZUG5 572 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 FAM160B2Q86V87 743 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 SGMS1Q86VZ5 419 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 PRPF38AQ8NAV1 312 aaKnown RBP22.88■■□□□ 1.25
CIRBP-220ENST00000588917 SMCR8Q8TEV9 937 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-220ENST00000588917 MAP3K14Q99558 947 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 HPS5Q9UPZ3 1129 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
CIRBP-220ENST00000588917 FLOT1O75955 427 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 SNHG28P0DPA3 235 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 FDX1P10109 184 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 PDHBP11177 359 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 P2RX7Q99572 595 aaKnown RBP22.87■■□□□ 1.25
CIRBP-220ENST00000588917 LRRC2Q9BYS8 371 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 ALDH8A1Q9H2A2 487 aaPredicted RBP22.87■■□□□ 1.25
CIRBP-220ENST00000588917 PDRG1Q9NUG6 133 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 ISY1Q9ULR0 285 aaKnown RBP22.87■■□□□ 1.25
CIRBP-220ENST00000588917 MTMR7Q9Y216 660 aa22.87■■□□□ 1.25
CIRBP-220ENST00000588917 TLR2O60603 784 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 CPA1P15085 419 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 ANKRD1Q15327 319 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 CCDC96Q2M329 555 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 ASPRV1Q53RT3 343 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 AGXT2Q9BYV1 514 aa22.86■■□□□ 1.25
CIRBP-220ENST00000588917 TMEM232C9JQI7 657 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 FKTNO75072 461 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 DDAH1O94760 285 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 PARP1P09874 1014 aaKnown RBP22.85■■□□□ 1.25
CIRBP-220ENST00000588917 CYP2C8P10632 490 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 DSG3P32926 999 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 STAT2P52630 851 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 HERVK_113P62684 666 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 ZNF543Q08ER8 600 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 TROAPQ12815 778 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
CIRBP-220ENST00000588917 CRHR2Q13324 411 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 LBX2Q6XYB7 198 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 ZNF654Q8IZM8 581 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 TCEANC2Q96MN5 208 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 TBC1D32Q96NH3 1257 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 NUP88Q99567 741 aaPredicted RBP22.85■■□□□ 1.25
CIRBP-220ENST00000588917 UPF3BQ9BZI7 483 aaKnown RBP22.85■■□□□ 1.25
CIRBP-220ENST00000588917 LOC285556D6RIA3 1793 aa22.85■■□□□ 1.25
CIRBP-220ENST00000588917 PTPRFP10586 1907 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 MYH4Q9Y623 1939 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 SLC34A2O95436 690 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 KIF5BP33176 963 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 COL9A3Q14050 684 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-220ENST00000588917 PPP2R5BQ15173 497 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 KCTD1Q719H9 257 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 MB21D1Q8N884 522 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 CTCFLQ8NI51 663 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-220ENST00000588917 SLF1Q9BQI6 1058 aa22.84■■□□□ 1.25
CIRBP-220ENST00000588917 GPHNQ9NQX3 736 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-220ENST00000588917 TNRC18O15417 2968 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-220ENST00000588917 NEK4P51957 841 aa22.83■■□□□ 1.25
CIRBP-220ENST00000588917 RCAN1P53805 252 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms