RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 ITIH6Q6UXX5 1313 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 SBF2Q86WG5 1849 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 A0A1B0GTH6 734 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 CCDC175P0C221 793 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 TSPY3P0CV98 308 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 TSPY8P0CW00 308 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 ATP1A3P13637 1013 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 GNA11P29992 359 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 CASQ1P31415 396 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 PRPHP41219 470 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 ST5P78524 1137 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 TFAP4Q01664 338 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 DPYDQ12882 1025 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 PTGDRQ13258 359 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF174Q15697 407 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 DTHD1Q6ZMT9 781 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-228ENST00000588781 SRBD1Q8N5C6 995 aaKnown RBP8.11□□□□□ -1.11
SPIDR-228ENST00000588781 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
SPIDR-228ENST00000588781 TNFRSF25Q93038 417 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 IQCDQ96DY2 449 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 RBM17Q96I25 401 aaKnown RBP8.11□□□□□ -1.11
SPIDR-228ENST00000588781 AK8Q96MA6 479 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 ANKIB1Q9P2G1 1089 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 RWDD2AQ9UIY3 292 aa8.11□□□□□ -1.11
SPIDR-228ENST00000588781 VWA3AA6NCI4 1184 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 USP27XA6NNY8 438 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 POTEB2H3BUK9 544 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 H7C1D1 291 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PLSCR1O15162 318 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 ATP8B1O43520 1251 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PRDM1O75626 825 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 STAT6P42226 847 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 AMPD3Q01432 767 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PAK1Q13153 545 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 KCNB1Q14721 858 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 NR1I3Q14994 352 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 TSR1Q2NL82 804 aaKnown RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF658Q5TYW1 1059 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 JAKMIP3Q5VZ66 844 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 RRAGBQ5VZM2 374 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PIK3AP1Q6ZUJ8 805 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 FAM114A1Q8IWE2 563 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 RASSF8Q8NHQ8 419 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 UBXN4Q92575 508 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 SPZ1Q9BXG8 430 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 LRRC27Q9C0I9 530 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PDGFDQ9GZP0 370 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 HSD3B7Q9H2F3 369 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 C6orf50Q9HD87 102 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 TFCP2L1Q9NZI6 479 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 MAGEC2Q9UBF1 373 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 SEC63Q9UGP8 760 aaKnown RBP8.1□□□□□ -1.11
SPIDR-228ENST00000588781 PPP2R2CQ9Y2T4 447 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 SUGT1Q9Y2Z0 365 aa8.1□□□□□ -1.11
SPIDR-228ENST00000588781 CYP2D7A0A087X1C5 515 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 BICDL2A1A5D9 508 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 KIF5CO60282 957 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 BBOX1O75936 387 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 FGFR1OPO95684 399 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 TUBBP07437 444 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 BMP6P22004 513 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 PRDX5P30044 214 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 UBA7P41226 1012 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 AFMP43652 599 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 CUL4BQ13620 913 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 FAM47AQ5JRC9 791 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 UTP14CQ5TAP6 766 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 CDKAL1Q5VV42 579 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 TMTC1Q8IUR5 882 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 KRT222Q8N1A0 295 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 CMTR1Q8N1G2 835 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 IGSF22Q8N9C0 903 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 DPF2Q92785 391 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 RRP36Q96EU6 259 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 NAP1L4Q99733 375 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 SGIP1Q9BQI5 828 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 RAB34Q9BZG1 259 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 CCSER1Q9C0I3 900 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 MYO1AQ9UBC5 1043 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
SPIDR-228ENST00000588781 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
SPIDR-228ENST00000588781 ZNF215Q9UL58 517 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms