RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 TFAP4Q01664 338 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 MAP2K5Q13163 448 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 PRPF38BQ5VTL8 546 aaKnown RBP16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 MB21D1Q8N884 522 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
RPRD1A-206ENST00000588459 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 F5H6K3 240 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 ERCC3P19447 782 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 PDE4AP27815 886 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 KLRC3Q07444 240 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 GRB14Q14449 540 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 NEDD1Q8NHV4 660 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
RPRD1A-206ENST00000588459 RPTORQ8N122 1335 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 TTLL1O95922 423 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 FGAP02671 866 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 TFRCP02786 760 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 ALX1Q15699 326 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 HMX1Q9NP08 348 aaPredicted RBP16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
RPRD1A-206ENST00000588459 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 FARP2O94887 1054 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 ADORA2AP29274 412 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 HAND2P61296 217 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 CACNB2Q08289 660 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 NPLOC4Q8TAT6 608 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 MKL1Q969V6 931 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 TOMM22Q9NS69 142 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 ANAPC4Q9UJX5 808 aa16.29■□□□□ 0.2
RPRD1A-206ENST00000588459 VWA5AO00534 786 aa16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 NMT2O60551 498 aa16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 CCND3P30281 292 aaPredicted RBP16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 UBE2Q1Q7Z7E8 422 aa16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 ADAMTS5Q9UNA0 930 aa16.28■□□□□ 0.2
RPRD1A-206ENST00000588459 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 GSPT1P15170 499 aaKnown RBP16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 DPP9Q86TI2 863 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 MROH8Q9H579 483 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 STX8Q9UNK0 236 aa16.27■□□□□ 0.2
RPRD1A-206ENST00000588459 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 ORC4O43929 436 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 SLC25A27O95847 323 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 HOXC6P09630 235 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 STAT3P40763 770 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 MFSD14CQ5VZR4 134 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 RASGRP2Q7LDG7 609 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 RIOX2Q8IUF8 465 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 NBPF3Q9H094 633 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 CEP290O15078 2479 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
RPRD1A-206ENST00000588459 HIP1O00291 1037 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 STRNO43815 780 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 COBLO75128 1261 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 BMP3P12645 472 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 CYP2C19P33261 490 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 DPF3Q92784 378 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 MMP19Q99542 508 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
RPRD1A-206ENST00000588459 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
RPRD1A-206ENST00000588459 PGK2P07205 417 aa16.24■□□□□ 0.19
RPRD1A-206ENST00000588459 FGRP09769 529 aa16.24■□□□□ 0.19
RPRD1A-206ENST00000588459 FCER1AP12319 257 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms