RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 PPP2R5BQ15173 497 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 TAF1CQ15572 869 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-218ENST00000588344 ADCK5Q3MIX3 580 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 TREML2Q5T2D2 321 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 LBX2Q6XYB7 198 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 SGMS1Q86VZ5 419 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 CLEC10AQ8IUN9 316 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 LRRC47Q8N1G4 583 aaKnown RBP10.61□□□□□ -0.71
CIRBP-218ENST00000588344 SMCR8Q8TEV9 937 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-218ENST00000588344 TANGO6Q9C0B7 1094 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-218ENST00000588344 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
CIRBP-218ENST00000588344 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
CIRBP-218ENST00000588344 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
CIRBP-218ENST00000588344 SH2B2O14492 632 aaPredicted RBP10.6□□□□□ -0.71
CIRBP-218ENST00000588344 KIF5BP33176 963 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 GNAQP50148 359 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 STAT2P52630 851 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 RCAN1P53805 252 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 ANTXR2P58335 489 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 AGXT2Q9BYV1 514 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 LY9Q9HBG7 655 aa10.6□□□□□ -0.71
CIRBP-218ENST00000588344 CCDC196A0A1B0GTZ2 297 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 ZBED4O75132 1171 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 FLOT1O75955 427 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 DDAH1O94760 285 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
CIRBP-218ENST00000588344 PDHBP11177 359 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 DSG3P32926 999 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 HERVK_113P62684 666 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 ZNF543Q08ER8 600 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 IKQ13123 557 aaPredicted RBP10.59□□□□□ -0.71
CIRBP-218ENST00000588344 CRHR2Q13324 411 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 KIAA1755Q5JYT7 1200 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 FAM83BQ5T0W9 1011 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 CHMP4CQ96CF2 233 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
CIRBP-218ENST00000588344 SLF1Q9BQI6 1058 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 LZTS2Q9BRK4 669 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 ADAMTS5Q9UNA0 930 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 RABGAP1Q9Y3P9 1069 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
CIRBP-218ENST00000588344 DOCK1Q14185 1865 aa10.59□□□□□ -0.71
CIRBP-218ENST00000588344 LAMB1P07942 1786 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 CYP2C8P10632 490 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
CIRBP-218ENST00000588344 OAZ1P54368 228 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 CCNA1P78396 465 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 TROAPQ12815 778 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 TRAF1Q13077 416 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 Q6ZUG5 572 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
CIRBP-218ENST00000588344 MORF4L1Q9UBU8 362 aa10.58□□□□□ -0.72
CIRBP-218ENST00000588344 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
CIRBP-218ENST00000588344 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
CIRBP-218ENST00000588344 GPR25O00155 361 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 ATP2A1O14983 1001 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 ZBTB43O43298 467 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 TBC1D8O95759 1140 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 COPB2P35606 906 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 EVCP57679 992 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 SP3Q02447 781 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 DGKZQ13574 1117 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 KIF22Q14807 665 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 FANCBQ8NB91 859 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 ZNF274Q96GC6 653 aaPredicted RBP10.57□□□□□ -0.72
CIRBP-218ENST00000588344 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 NUP88Q99567 741 aaPredicted RBP10.57□□□□□ -0.72
CIRBP-218ENST00000588344 LRRC2Q9BYS8 371 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 RBM28Q9NW13 759 aaKnown RBP10.57□□□□□ -0.72
CIRBP-218ENST00000588344 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
CIRBP-218ENST00000588344 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 VWA5AO00534 786 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 DHX16O60231 1041 aaKnown RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 FKTNO75072 461 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 SLC25A27O95847 323 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 GNRH1P01148 92 aa10.56□□□□□ -0.72
CIRBP-218ENST00000588344 HSPA1AP0DMV8 641 aaKnown RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 HSPA1BP0DMV9 641 aaKnown RBP10.56□□□□□ -0.72
CIRBP-218ENST00000588344 BCRP11274 1271 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms