RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
PRKCSH-207ENST00000588269 PLEKHH3Q7Z736 793 aa13.88□□□□□ -0.19
PRKCSH-207ENST00000588269 NEDD1Q8NHV4 660 aa13.88□□□□□ -0.19
PRKCSH-207ENST00000588269 CEP95Q96GE4 821 aa13.88□□□□□ -0.19
PRKCSH-207ENST00000588269 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
PRKCSH-207ENST00000588269 RANBP6O60518 1105 aaKnown RBP13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 TFAP4Q01664 338 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 IMMTQ16891 758 aaKnown RBP13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 GPR142Q7Z601 462 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 APBA2Q99767 749 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 TXNRD2Q9NNW7 524 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
PRKCSH-207ENST00000588269 IGKV6D-41A0A0C4DH26 115 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 ZNF213O14771 459 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 FGAP02671 866 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 XRCC5P13010 732 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 PDE4AP27815 886 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 DSG3P32926 999 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 MFSD6Q6ZSS7 791 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 SHCBP1Q8NEM2 672 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 ESR2Q92731 530 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 PAWRQ96IZ0 340 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 SLF1Q9BQI6 1058 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 MROH8Q9H579 483 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 A0A0G2JMZ2 1700 aa13.86□□□□□ -0.19
PRKCSH-207ENST00000588269 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 F5H6K3 240 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 FOXP2O15409 715 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 EVI5O60447 810 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 SLC25A27O95847 323 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 NDUFB10O96000 172 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 KLRC3Q07444 240 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 PLS1Q14651 629 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 MKL1Q969V6 931 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 PAK6Q9NQU5 681 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 FEM1BQ9UK73 627 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 ZMYND8Q9ULU4 1186 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 SZT2Q5T011 3432 aa13.85□□□□□ -0.19
PRKCSH-207ENST00000588269 STRNO43815 780 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 FDX1P10109 184 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 SLC1A4P43007 532 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 IKQ13123 557 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 SIAH1Q8IUQ4 282 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 ATG4CQ96DT6 458 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 PORCNQ9H237 461 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 CNNM2Q9H8M5 875 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 LAMA4Q16363 1823 aa13.84□□□□□ -0.19
PRKCSH-207ENST00000588269 ZBED4O75132 1171 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 CNMDO75829 334 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 FGRP09769 529 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 BMP3P12645 472 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 SYN1P17600 705 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 STAT2P52630 851 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 HAND2P61296 217 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 MAP2K5Q13163 448 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 SLFN13Q68D06 897 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 FAM160B2Q86V87 743 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 C7orf61Q8IZ16 206 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 ABRAQ8N0Z2 381 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 GMCL1Q96IK5 515 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 BTBD7Q9P203 1132 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 GJD2Q9UKL4 321 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 NR2E3Q9Y5X4 410 aa13.83□□□□□ -0.2
PRKCSH-207ENST00000588269 MYH4Q9Y623 1939 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms