RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 APPBP2Q92624 585 aa20.28■□□□□ 0.84
TMED1-203ENST00000588259 UBE2OQ9C0C9 1292 aaKnown RBP20.28■□□□□ 0.84
TMED1-203ENST00000588259 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
TMED1-203ENST00000588259 COBLO75128 1261 aa20.27■□□□□ 0.84
TMED1-203ENST00000588259 SZT2Q5T011 3432 aa20.27■□□□□ 0.84
TMED1-203ENST00000588259 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
TMED1-203ENST00000588259 RNF113AO15541 343 aaKnown RBP20.26■□□□□ 0.83
TMED1-203ENST00000588259 BMP8BP34820 402 aa20.26■□□□□ 0.83
TMED1-203ENST00000588259 TMEM132BQ14DG7 1078 aa20.26■□□□□ 0.83
TMED1-203ENST00000588259 OSBP2Q969R2 916 aa20.26■□□□□ 0.83
TMED1-203ENST00000588259 MMP19Q99542 508 aa20.26■□□□□ 0.83
TMED1-203ENST00000588259 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 PLXNA1Q9UIW2 1896 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 KBTBD13C9JR72 458 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 DNM1LO00429 736 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 GPAA1O43292 621 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 SLC25A27O95847 323 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 ZFYP08048 801 aaPredicted RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 MDM2Q00987 491 aaPredicted RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 GJC2Q5T442 439 aaPredicted RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 ABRAQ8N0Z2 381 aa20.25■□□□□ 0.83
TMED1-203ENST00000588259 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
TMED1-203ENST00000588259 RASA1P20936 1047 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 KCTD2Q14681 263 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 SBK1Q52WX2 424 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 PRAMEF19Q5SWL8 479 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 GIMAP6Q6P9H5 292 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 TDHQ8IZJ6 230 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 ARRDC4Q8NCT1 418 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 LBHD1Q9BQE6 289 aaPredicted RBP20.24■□□□□ 0.83
TMED1-203ENST00000588259 PPP1R9AQ9ULJ8 1098 aa20.24■□□□□ 0.83
TMED1-203ENST00000588259 M0R2C6 588 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 VWA5AO00534 786 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 SEPT4O43236 478 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 PGK2P07205 417 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 GNAT2P19087 354 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 STAT3P40763 770 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 SLC4A3P48751 1232 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 MAML3Q96JK9 1138 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 FSD1Q9BTV5 496 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMED1-203ENST00000588259 EPB41L4AQ9HCS5 686 aaPredicted RBP20.23■□□□□ 0.83
TMED1-203ENST00000588259 PRKAG2Q9UGJ0 569 aa20.23■□□□□ 0.83
TMED1-203ENST00000588259 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
TMED1-203ENST00000588259 CTDP1Q9Y5B0 961 aaPredicted RBP20.23■□□□□ 0.83
TMED1-203ENST00000588259 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 ERC2O15083 957 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 PRDM1O75626 825 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 RIOX2Q8IUF8 465 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 SLF1Q9BQI6 1058 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 ZNF287Q9HBT7 754 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 ZBTB47Q9UFB7 747 aaPredicted RBP20.22■□□□□ 0.83
TMED1-203ENST00000588259 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
TMED1-203ENST00000588259 SMCHD1A6NHR9 2005 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 NDUFB10O96000 172 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 COPB2P35606 906 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 RTP1P59025 263 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
TMED1-203ENST00000588259 NACAP1Q9BZK3 213 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 ADAMTS5Q9UNA0 930 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 DNAH12Q6ZR08 3092 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 TTC41PQ6P2S7 1318 aa20.21■□□□□ 0.83
TMED1-203ENST00000588259 LAMA3Q16787 3333 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 F5H6K3 240 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 IGHA2P01877 340 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 KLRC3Q07444 240 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
TMED1-203ENST00000588259 NYAP2Q9P242 653 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 ZNF214Q9UL59 606 aaPredicted RBP20.2■□□□□ 0.82
TMED1-203ENST00000588259 PCDHB15Q9Y5E8 787 aa20.2■□□□□ 0.82
TMED1-203ENST00000588259 FAM47AQ5JRC9 791 aa20.19■□□□□ 0.82
TMED1-203ENST00000588259 SNRNP48Q6IEG0 339 aaKnown RBP20.19■□□□□ 0.82
TMED1-203ENST00000588259 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
TMED1-203ENST00000588259 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
TMED1-203ENST00000588259 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
TMED1-203ENST00000588259 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
TMED1-203ENST00000588259 PRDM5Q9NQX1 630 aaPredicted RBP20.19■□□□□ 0.82
TMED1-203ENST00000588259 SLC3A2P08195 630 aaKnown RBP20.18■□□□□ 0.82
TMED1-203ENST00000588259 RARBP10826 455 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 ADCYAP1R1P41586 468 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 IFNL3Q8IZI9 196 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 DEFB123Q8N688 67 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 KIFC2Q96AC6 838 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 DDX11Q96FC9 970 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 SEC62Q99442 399 aaKnown RBP20.18■□□□□ 0.82
TMED1-203ENST00000588259 NAPBQ9H115 298 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 XPNPEP3Q9NQH7 507 aa20.18■□□□□ 0.82
TMED1-203ENST00000588259 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
TMED1-203ENST00000588259 ZBED4O75132 1171 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 TSPY3P0CV98 308 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 TSPY8P0CW00 308 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 MX1P20591 662 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 PDE4BQ07343 736 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 LRRC41Q15345 812 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 LRIT3Q3SXY7 679 aa20.17■□□□□ 0.82
TMED1-203ENST00000588259 PRPF38AQ8NAV1 312 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms