RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 AKNAD1Q5T1N1 836 aa22.72■■□□□ 1.23
CIRBP-217ENST00000588230 SAMD1Q6SPF0 538 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-217ENST00000588230 MFSD6Q6ZSS7 791 aa22.72■■□□□ 1.23
CIRBP-217ENST00000588230 USP6NLQ92738 828 aa22.72■■□□□ 1.23
CIRBP-217ENST00000588230 RNF41Q9H4P4 317 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-217ENST00000588230 BTBD7Q9P203 1132 aa22.72■■□□□ 1.23
CIRBP-217ENST00000588230 PARP14Q460N5 1801 aa22.72■■□□□ 1.23
CIRBP-217ENST00000588230 PCP11498 1178 aaKnown RBP22.71■■□□□ 1.23
CIRBP-217ENST00000588230 MAPK4P31152 587 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 DSG3P32926 999 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 GJA8P48165 433 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 FAM83BQ5T0W9 1011 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 SKAP1Q86WV1 359 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 RNF208Q9H0X6 261 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 IL25Q9H293 177 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 CWC22Q9HCG8 908 aaKnown RBP22.71■■□□□ 1.23
CIRBP-217ENST00000588230 BIN2Q9UBW5 565 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-217ENST00000588230 SYNPO2Q9UMS6 1093 aa22.71■■□□□ 1.23
CIRBP-217ENST00000588230 MYH4Q9Y623 1939 aa22.7■■□□□ 1.23
CIRBP-217ENST00000588230 NDUFB10O96000 172 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 MORN1Q5T089 497 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 GPR142Q7Z601 462 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 UBE2Q1Q7Z7E8 422 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 TBC1D10CQ8IV04 446 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 LRRC47Q8N1G4 583 aaKnown RBP22.7■■□□□ 1.22
CIRBP-217ENST00000588230 STAG1Q8WVM7 1258 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 STX8Q9UNK0 236 aa22.7■■□□□ 1.22
CIRBP-217ENST00000588230 NMT2O60551 498 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 TRIM32Q13049 653 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 IMMTQ16891 758 aaKnown RBP22.69■■□□□ 1.22
CIRBP-217ENST00000588230 PRPF38BQ5VTL8 546 aaKnown RBP22.69■■□□□ 1.22
CIRBP-217ENST00000588230 MB21D1Q8N884 522 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 TRIB2Q92519 343 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 NUP88Q99567 741 aaPredicted RBP22.69■■□□□ 1.22
CIRBP-217ENST00000588230 NBPF3Q9H094 633 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 PAK6Q9NQU5 681 aaPredicted RBP22.69■■□□□ 1.22
CIRBP-217ENST00000588230 IL17RBQ9NRM6 502 aa22.69■■□□□ 1.22
CIRBP-217ENST00000588230 HMGCRP04035 888 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 WDR78Q5VTH9 848 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 GMCL1P1Q8NEA9 526 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 SOCS4Q8WXH5 440 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 ATG4CQ96DT6 458 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 FBXO28Q9NVF7 368 aa22.68■■□□□ 1.22
CIRBP-217ENST00000588230 SGSM2O43147 1006 aa22.67■■□□□ 1.22
CIRBP-217ENST00000588230 XRCC5P13010 732 aaKnown RBP22.67■■□□□ 1.22
CIRBP-217ENST00000588230 BMP2KLQ5H9B9 411 aa22.67■■□□□ 1.22
CIRBP-217ENST00000588230 SLFN13Q68D06 897 aa22.67■■□□□ 1.22
CIRBP-217ENST00000588230 PLEKHH3Q7Z736 793 aa22.67■■□□□ 1.22
CIRBP-217ENST00000588230 U2AF1L4Q8WU68 220 aaKnown RBP22.67■■□□□ 1.22
CIRBP-217ENST00000588230 NUDT12Q9BQG2 462 aa22.67■■□□□ 1.22
CIRBP-217ENST00000588230 CYP2B6P20813 491 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 PLS1Q14651 629 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 MAP3K21Q5TCX8 1036 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 NKX2-3Q8TAU0 364 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 ESR2Q92731 530 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 PPP1R9AQ9ULJ8 1098 aa22.66■■□□□ 1.22
CIRBP-217ENST00000588230 ISY1Q9ULR0 285 aaKnown RBP22.66■■□□□ 1.22
CIRBP-217ENST00000588230 SLF1Q9BQI6 1058 aa22.65■■□□□ 1.22
CIRBP-217ENST00000588230 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
CIRBP-217ENST00000588230 NEDD4P46934 1319 aa22.64■■□□□ 1.22
CIRBP-217ENST00000588230 SGPL1O95470 568 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 BMP3P12645 472 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 NT5C2P49902 561 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 PTH1RQ03431 593 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 KIAA1211Q6ZU35 1233 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 MOV10L1Q9BXT6 1211 aaKnown RBP22.64■■□□□ 1.21
CIRBP-217ENST00000588230 CRISPLD2Q9H0B8 497 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 ADAMTS5Q9UNA0 930 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 IVNS1ABPQ9Y6Y0 642 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
CIRBP-217ENST00000588230 ZNF236Q9UL36 1845 aa22.64■■□□□ 1.21
CIRBP-217ENST00000588230 VWA5AO00534 786 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 CCL14Q16627 93 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 PRPF38AQ8NAV1 312 aaKnown RBP22.63■■□□□ 1.21
CIRBP-217ENST00000588230 CHMP4CQ96CF2 233 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 DEFB118Q96PH6 123 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 APBA2Q99767 749 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.63■■□□□ 1.214e-7■■■■□ 22.1
CIRBP-217ENST00000588230 PPP4R2Q9NY27 417 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 FEM1BQ9UK73 627 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 LAMA4Q16363 1823 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 CEP290O15078 2479 aa22.63■■□□□ 1.21
CIRBP-217ENST00000588230 KDM4AO75164 1064 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 TOP1P11387 765 aaKnown RBP22.62■■□□□ 1.21
CIRBP-217ENST00000588230 PTPREP23469 700 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 MCCP23508 829 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 RGS2P41220 211 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 SLC1A4P43007 532 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 NOVP48745 357 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 MAP2K5Q13163 448 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 GRB14Q14449 540 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 TMEM132BQ14DG7 1078 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 SHCBP1Q8NEM2 672 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 TTC14Q96N46 770 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 KRT23Q9C075 422 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 CNNM2Q9H8M5 875 aa22.62■■□□□ 1.21
CIRBP-217ENST00000588230 MTMR7Q9Y216 660 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms