RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 PLS1Q14651 629 aa18.61■□□□□ 0.57
TRAPPC6A-204ENST00000588062 LRRC26Q2I0M4 334 aa18.61■□□□□ 0.57
TRAPPC6A-204ENST00000588062 SMCHD1A6NHR9 2005 aa18.61■□□□□ 0.57
TRAPPC6A-204ENST00000588062 ROBO3Q96MS0 1386 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 M0R2C6 588 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 GPAA1O43292 621 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 MSCO60682 206 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 CNGA1P29973 690 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 NCAPG2Q86XI2 1143 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 REPS2Q8NFH8 660 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 PI4K2BQ8TCG2 481 aa18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 OTUD7AQ8TE49 926 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC6A-204ENST00000588062 TTC41PQ6P2S7 1318 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 MINDY4BA8MYZ0 360 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 VWA5AO00534 786 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 SLC25A27O95847 323 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 STK11IPQ8N1F8 1099 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 NYAP2Q9P242 653 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
TRAPPC6A-204ENST00000588062 IGKV6D-41A0A0C4DH26 115 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PATL2C9JE40 543 aaKnown RBP18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 FCER1AP12319 257 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 GNAT2P19087 354 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MAML3Q96JK9 1138 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SEC62Q99442 399 aaKnown RBP18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MKNK2Q9HBH9 465 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SLC5A4Q9NY91 659 aa18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ZNF214Q9UL59 606 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC6A-204ENST00000588062 STAT3P40763 770 aa18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PRAMEF19Q5SWL8 479 aa18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 LRCH3Q96II8 777 aa18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 NUP88Q99567 741 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SENP6Q9GZR1 1112 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC6A-204ENST00000588062 F5H6K3 240 aa18.56■□□□□ 0.56
TRAPPC6A-204ENST00000588062 DNM1LO00429 736 aa18.56■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SEPT4O43236 478 aa18.56■□□□□ 0.56
TRAPPC6A-204ENST00000588062 KLRC3Q07444 240 aa18.56■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MYH4Q9Y623 1939 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ERC2O15083 957 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 RAD21O60216 631 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PRDM1O75626 825 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 NDUFB10O96000 172 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 APPP05067 770 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 TDO2P48775 406 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 GJC2Q5T442 439 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ANO1Q5XXA6 986 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MKL1Q969V6 931 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PLXNA1Q9UIW2 1896 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PGK2P07205 417 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 LRRFIP1Q32MZ4 808 aaKnown RBP18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ZNF792Q3KQV3 632 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ZNF444Q8N0Y2 327 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ARRDC4Q8NCT1 418 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MMP19Q99542 508 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MTMR4Q9NYA4 1195 aa18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 DIS3Q9Y2L1 958 aaKnown RBP18.54■□□□□ 0.56
TRAPPC6A-204ENST00000588062 MX1P20591 662 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ATN1P54259 1190 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 LRIT3Q3SXY7 679 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 TDHQ8IZJ6 230 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 PRPF38AQ8NAV1 312 aaKnown RBP18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 CEP95Q96GE4 821 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 NRBP1Q9UHY1 535 aa18.53■□□□□ 0.56
TRAPPC6A-204ENST00000588062 FOXP2O15409 715 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 COPB2P35606 906 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 KCTD2Q14681 263 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 NEDD1Q8NHV4 660 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 TINF2Q9BSI4 451 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
TRAPPC6A-204ENST00000588062 ATP2A1O14983 1001 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 MDM2Q00987 491 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 LRRC41Q15345 812 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 FAM47AQ5JRC9 791 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 SLC39A5Q6ZMH5 540 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 CRBNQ96SW2 442 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 TEX13BQ9BXU2 312 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 SYNPO2Q9UMS6 1093 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 PLIN4Q96Q06 1357 aa18.51■□□□□ 0.55
TRAPPC6A-204ENST00000588062 TTLL1O95922 423 aa18.5■□□□□ 0.55
TRAPPC6A-204ENST00000588062 ZNF865P0CJ78 1059 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC6A-204ENST00000588062 RTP1P59025 263 aa18.5■□□□□ 0.55
TRAPPC6A-204ENST00000588062 PPARAQ07869 468 aa18.5■□□□□ 0.55
TRAPPC6A-204ENST00000588062 SNX17Q15036 470 aa18.5■□□□□ 0.55
TRAPPC6A-204ENST00000588062 SNRNP48Q6IEG0 339 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms