RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RPIAP49247 311 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 GMPSP49915 693 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 SKOR1P84550 965 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 ALX1Q15699 326 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 MAP7D1Q3KQU3 841 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 SLFNL1Q499Z3 407 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 SLC9C2Q5TAH2 1124 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 CCDC129Q6ZRS4 1044 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 ZNF804AQ7Z570 1209 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 CERS3Q8IU89 383 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 PLPP7Q8NBV4 271 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 WDR66Q8TBY9 1149 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 BRF1Q92994 677 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 ZNF396Q96N95 335 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 SEC62Q99442 399 aaKnown RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 TAF1DQ9H5J8 278 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 RRAGDQ9NQL2 400 aaPredicted RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 DDX19AQ9NUU7 478 aaKnown RBP6.69□□□□□ -1.34
SDF2-206ENST00000587788 LRP2BPQ9P2M1 347 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 ZMYM6O95789 1325 aa6.69□□□□□ -1.34
SDF2-206ENST00000587788 AKAP11Q9UKA4 1901 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 TMEM88BA6NKF7 163 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 ZNF213O14771 459 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 CTAGE5O15320 804 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 EGFRP00533 1210 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 TPM3P06753 285 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 LDHCP07864 332 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 GNAT2P19087 354 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 EPHX2P34913 555 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 ADD2P35612 726 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MCAMP43121 646 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 HTRA3P83110 453 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 PDE4CQ08493 712 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 TRDNQ13061 729 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MMRN1Q13201 1228 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 NCOA4Q13772 614 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 CDC37L1Q7L3B6 337 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 PODNQ7Z5L7 613 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 RALYLQ86SE5 291 aaKnown RBP6.68□□□□□ -1.34
SDF2-206ENST00000587788 TDRD7Q8NHU6 1098 aaKnown RBP6.68□□□□□ -1.34
SDF2-206ENST00000587788 NCOA7Q8NI08 942 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 OSBP2Q969R2 916 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 EMID1Q96A84 441 aaPredicted RBP6.68□□□□□ -1.34
SDF2-206ENST00000587788 SLC10A4Q96EP9 437 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MTA3Q9BTC8 594 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MXD3Q9BW11 206 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MRIQ9BWK5 157 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 GPRC5DQ9NZD1 345 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 HACL1Q9UJ83 578 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
SDF2-206ENST00000587788 NOL7Q9UMY1 257 aaKnown RBP6.68□□□□□ -1.34
SDF2-206ENST00000587788 SUGT1Q9Y2Z0 365 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 MAP4K5Q9Y4K4 846 aa6.68□□□□□ -1.34
SDF2-206ENST00000587788 CDK5RAP2Q96SN8 1893 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 IQCA1LA6NCM1 817 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 FAM196BA6NMK8 535 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 PATL2C9JE40 543 aaKnown RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 M0R2C6 588 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 CDKL5O76039 1030 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 FGAP02671 866 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 IL1R1P14778 569 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 PDIA3P30101 505 aaKnown RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 GYG1P46976 350 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 HIRAP54198 1017 aaPredicted RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 GSTO1P78417 241 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
SDF2-206ENST00000587788 SCRN1Q12765 414 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 RESTQ13127 1097 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 STK3Q13188 491 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 NBPF20Q3BBV1 942 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 FOXD4L6Q3SYB3 417 aaPredicted RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 EAPPQ56P03 285 aaPredicted RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 CPLX2Q6PUV4 134 aaKnown RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 FOXD4L3Q6VB84 417 aaPredicted RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 STOX1Q6ZVD7 989 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 NSUN7Q8NE18 718 aaKnown RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 LEO1Q8WVC0 666 aaPredicted RBP6.67□□□□□ -1.34
SDF2-206ENST00000587788 CHAMP1Q96JM3 812 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 TMEM87BQ96K49 555 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 NUP62CLQ9H1M0 184 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 CNNM2Q9H8M5 875 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 CD209Q9NNX6 404 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 ZMIZ1Q9ULJ6 1067 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 TAF6LQ9Y6J9 622 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 MYH2Q9UKX2 1941 aa6.67□□□□□ -1.34
SDF2-206ENST00000587788 COL1A1P02452 1464 aaPredicted RBP6.66□□□□□ -1.34
SDF2-206ENST00000587788 PTPDC1A2A3K4 754 aa6.66□□□□□ -1.34
SDF2-206ENST00000587788 ZBTB24O43167 697 aaPredicted RBP6.66□□□□□ -1.34
SDF2-206ENST00000587788 GPAA1O43292 621 aa6.66□□□□□ -1.34
SDF2-206ENST00000587788 PRC1O43663 620 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms