RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SLC12A7Q9Y666 1083 aa21.37■■□□□ 1.01
H3F3B-206ENST00000587560 PFKFB2O60825 505 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 MAP2K2P36507 400 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 FGD1P98174 961 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 ATP2B2Q01814 1243 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 GRM4Q14833 912 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 USP17L2Q6R6M4 530 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 CATIPQ7Z7H3 387 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 LPAR1Q92633 364 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 MYL10Q9BUA6 226 aa21.36■■□□□ 1.01
H3F3B-206ENST00000587560 PALM3A6NDB9 673 aaPredicted RBP21.35■■□□□ 1.01
H3F3B-206ENST00000587560 TRIM75PA6NK02 468 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 SLC10A3P09131 477 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 FXR1P51114 621 aaKnown RBP eCLIP21.35■■□□□ 1.01
H3F3B-206ENST00000587560 USP14P54578 494 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 NFXL1Q6ZNB6 911 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 DCAF4Q8WV16 495 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 ZSCAN31Q96LW9 406 aaPredicted RBP21.35■■□□□ 1.01
H3F3B-206ENST00000587560 GOPCQ9HD26 462 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 MAD2L2Q9UI95 211 aa21.35■■□□□ 1.01
H3F3B-206ENST00000587560 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
H3F3B-206ENST00000587560 ZBTB43O43298 467 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 CALM1P0DP23 149 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 CALM2P0DP24 149 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 CALM3P0DP25 149 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 ZNF543Q08ER8 600 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 SLFN13Q68D06 897 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 FANCBQ8NB91 859 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
H3F3B-206ENST00000587560 SZT2Q5T011 3432 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 TESPA1A2RU30 521 aaPredicted RBP21.33■■□□□ 1.01
H3F3B-206ENST00000587560 GOLGA8BA8MQT2 603 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 CDC27P30260 824 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 HMGCS2P54868 508 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 PPP2R5BQ15173 497 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 SLC35G1Q2M3R5 365 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 MICU3Q86XE3 530 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 PROCA1Q8NCQ7 364 aaPredicted RBP21.33■■□□□ 1.01
H3F3B-206ENST00000587560 FEZ1Q99689 392 aa21.33■■□□□ 1.01
H3F3B-206ENST00000587560 SH2B1Q9NRF2 756 aaPredicted RBP21.33■■□□□ 1.01
H3F3B-206ENST00000587560 WDR46O15213 610 aaKnown RBP21.32■■□□□ 1
H3F3B-206ENST00000587560 PLA2G6O60733 806 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 VCAM1P19320 739 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 RXRAP19793 462 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 ZNF157P51786 506 aaPredicted RBP21.32■■□□□ 1
H3F3B-206ENST00000587560 FUT2Q10981 343 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 SCRN1Q12765 414 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 NTRK3Q16288 839 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 BTNL9Q6UXG8 535 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 NOL8Q76FK4 1167 aaKnown RBP21.32■■□□□ 1
H3F3B-206ENST00000587560 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 STAG2Q8N3U4 1231 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 GTF3C6Q969F1 213 aa21.32■■□□□ 1
H3F3B-206ENST00000587560 MKI67P46013 3256 aaKnown RBP21.31■■□□□ 1
H3F3B-206ENST00000587560 SNAPC2Q13487 334 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 CUL4AQ13619 759 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 ZYXQ15942 572 aaKnown RBP21.31■■□□□ 1
H3F3B-206ENST00000587560 ASPRV1Q53RT3 343 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 GPAT2Q6NUI2 795 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 SYNE3Q6ZMZ3 975 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 CCDC102AQ96A19 550 aa21.31■■□□□ 1
H3F3B-206ENST00000587560 GOLGA8AA7E2F4 631 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 K7ELQ4 463 aaPredicted RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 PARP1P09874 1014 aaKnown RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 BMP3P12645 472 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 METAP2P50579 478 aaKnown RBP eCLIP21.3■■□□□ 1
H3F3B-206ENST00000587560 GTF2A2P52657 109 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 RTN1Q16799 776 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 GPATCH4Q5T3I0 446 aaKnown RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 NECAB1Q8N987 351 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 NUP133Q8WUM0 1156 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 NUP88Q99567 741 aaPredicted RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 SLKQ9H2G2 1235 aaPredicted RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 NCOA5Q9HCD5 579 aaKnown RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 RBM28Q9NW13 759 aaKnown RBP21.3■■□□□ 1
H3F3B-206ENST00000587560 A0A0C4DFX4 3053 aa21.3■■□□□ 1
H3F3B-206ENST00000587560 BAZ2BQ9UIF8 2168 aaKnown RBP21.29■■□□□ 1
H3F3B-206ENST00000587560 CTDNEP1O95476 244 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 SMARCA1P28370 1054 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 HOXA7P31268 230 aaPredicted RBP21.29■■□□□ 1
H3F3B-206ENST00000587560 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
H3F3B-206ENST00000587560 SLC1A4P43007 532 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 TMTC3Q6ZXV5 915 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 NBPF11Q86T75 865 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 BRI3BPQ8WY22 251 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 A0A0G2JMZ2 1700 aa21.29■■□□□ 1
H3F3B-206ENST00000587560 CYTH3O43739 400 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 CETPP11597 493 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 KIF5BP33176 963 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 CCT2P78371 535 aaKnown RBP21.28■■□□□ 1
H3F3B-206ENST00000587560 TREML2Q5T2D2 321 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 TTBK2Q6IQ55 1244 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 CATSPERGQ6ZRH7 1159 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 KCTD1Q719H9 257 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 CCDC144CPQ8IYA2 1237 aa21.28■■□□□ 1
H3F3B-206ENST00000587560 SRBD1Q8N5C6 995 aaKnown RBP21.28■■□□□ 1
H3F3B-206ENST00000587560 CTCFLQ8NI51 663 aaPredicted RBP21.28■■□□□ 1
H3F3B-206ENST00000587560 MTMR8Q96EF0 704 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms