RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
VMP1-204ENST00000587259 TBC1D32Q96NH3 1257 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
VMP1-204ENST00000587259 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 FRMPD3Q5JV73 1810 aa9.37□□□□□ -0.91
VMP1-204ENST00000587259 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 A0A1W2PRG0 241 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
VMP1-204ENST00000587259 REC8O95072 547 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 CYP2D6P10635 497 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 CAPN2P17655 700 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 PTPREP23469 700 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 SHMT1P34896 483 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 RTP1P59025 263 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 ATP2B2Q01814 1243 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 SEPT2Q15019 361 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 CERKLQ49MI3 558 aaPredicted RBP9.36□□□□□ -0.91
VMP1-204ENST00000587259 MFSD14CQ5VZR4 134 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 SH3RF1Q7Z6J0 888 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 SLC44A5Q8NCS7 719 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 FERMT2Q96AC1 680 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 PRDM5Q9NQX1 630 aaPredicted RBP9.36□□□□□ -0.91
VMP1-204ENST00000587259 DDX20Q9UHI6 824 aaKnown RBP9.36□□□□□ -0.91
VMP1-204ENST00000587259 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
VMP1-204ENST00000587259 MYH1P12882 1939 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 SLC15A5A6NIM6 579 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 APBB1O00213 710 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 MPHOSPH10O00566 681 aaKnown RBP9.35□□□□□ -0.91
VMP1-204ENST00000587259 GLRX3O76003 335 aaKnown RBP9.35□□□□□ -0.91
VMP1-204ENST00000587259 CHGBP05060 677 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 CYBAP13498 195 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 GRB14Q14449 540 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 SHHQ15465 462 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
VMP1-204ENST00000587259 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
VMP1-204ENST00000587259 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 LBHD1Q9BQE6 289 aaPredicted RBP9.35□□□□□ -0.91
VMP1-204ENST00000587259 MOV10L1Q9BXT6 1211 aaKnown RBP9.35□□□□□ -0.91
VMP1-204ENST00000587259 GPR108Q9NPR9 543 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 VCANP13611 3396 aa9.35□□□□□ -0.91
VMP1-204ENST00000587259 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 COBLO75128 1261 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 IFIT2P09913 472 aaKnown RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 GSPT1P15170 499 aaKnown RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 ADORA2AP29274 412 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 TRIM60Q495X7 471 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 SPICE1Q8N0Z3 855 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 BADQ92934 168 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
VMP1-204ENST00000587259 DYNLL2Q96FJ2 89 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 C22orf23Q9BZE7 217 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 TANGO6Q9C0B7 1094 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 IL1RAPL2Q9NP60 686 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
VMP1-204ENST00000587259 CYP2D7A0A087X1C5 515 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 TRIM43BA6NCK2 446 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 IGHA2P01877 340 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 POLR3DP05423 398 aaPredicted RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 ERCC3P19447 782 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 SDSP20132 328 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 ITGB8P26012 769 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 ADCYAP1R1P41586 468 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 CCNA1P78396 465 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 PLS1Q14651 629 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 FAM47AQ5JRC9 791 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 SLC39A5Q6ZMH5 540 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 DPP9Q86TI2 863 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 AACSQ86V21 672 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 GTF3C2Q8WUA4 911 aaPredicted RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 MYLIPQ8WY64 445 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 LPAR1Q92633 364 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 TRIM43Q96BQ3 446 aaPredicted RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 ATG4CQ96DT6 458 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 ZNF512BQ96KM6 892 aaPredicted RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 CDX2Q99626 313 aaPredicted RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 RIOK1Q9BRS2 568 aaKnown RBP9.33□□□□□ -0.92
VMP1-204ENST00000587259 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 PRUNE2Q8WUY3 3088 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 LTBP2Q14767 1821 aa9.33□□□□□ -0.92
VMP1-204ENST00000587259 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
VMP1-204ENST00000587259 HIP1O00291 1037 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms