RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 CAPN2P17655 700 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 CCND3P30281 292 aaPredicted RBP22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 KLRC3Q07444 240 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 CHD1LQ86WJ1 897 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 NPLOC4Q8TAT6 608 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 DIS3LQ8TF46 1054 aaKnown RBP22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 CEP95Q96GE4 821 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 FAM227BQ96M60 508 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 FLRT1Q9NZU1 646 aa22.66■■□□□ 1.22
CLPTM1-206ENST00000586975 ADORA2AP29274 412 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 TFAP4Q01664 338 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 CTDSPL2Q05D32 466 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 TMEM132BQ14DG7 1078 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 VPS53Q5VIR6 699 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 NECAB2Q7Z6G3 386 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 SHCBP1Q8NEM2 672 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 MROH8Q9H579 483 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 HELLSQ9NRZ9 838 aa22.65■■□□□ 1.22
CLPTM1-206ENST00000586975 IGKV6D-41A0A0C4DH26 115 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 STRNO43815 780 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 NDUFB10O96000 172 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 CNGA1P29973 690 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 LRRC47Q8N1G4 583 aaKnown RBP22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 MTMR4Q9NYA4 1195 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 PPP1R9AQ9ULJ8 1098 aa22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 ISY1Q9ULR0 285 aaKnown RBP22.64■■□□□ 1.21
CLPTM1-206ENST00000586975 A0A0D9SFI3 127 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 VWA5AO00534 786 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 FOXP2O15409 715 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 TTLL1O95922 423 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 CYP2C19P33261 490 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 NUCB1Q02818 461 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 CHMP4CQ96CF2 233 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
CLPTM1-206ENST00000586975 HOXC6P09630 235 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 SLC4A3P48751 1232 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 NMIQ13287 307 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 MCMDC2Q4G0Z9 681 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 ANKLE1Q8NAG6 615 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 NEDD1Q8NHV4 660 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 SLF1Q9BQI6 1058 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 OGDHLQ9ULD0 1010 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 CTDP1Q9Y5B0 961 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 NR2E3Q9Y5X4 410 aa22.62■■□□□ 1.21
CLPTM1-206ENST00000586975 TSPY2A6NKD2 308 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 EVI5O60447 810 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 SLC25A27O95847 323 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 FCER1AP12319 257 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 STAT3P40763 770 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 NBPF3Q9H094 633 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 TOMM22Q9NS69 142 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 SLC5A4Q9NY91 659 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 ADAMTS5Q9UNA0 930 aa22.61■■□□□ 1.21
CLPTM1-206ENST00000586975 COBLO75128 1261 aa22.6■■□□□ 1.21
CLPTM1-206ENST00000586975 MKL1Q969V6 931 aa22.6■■□□□ 1.21
CLPTM1-206ENST00000586975 KIFC2Q96AC6 838 aa22.6■■□□□ 1.21
CLPTM1-206ENST00000586975 MMP19Q99542 508 aa22.6■■□□□ 1.21
CLPTM1-206ENST00000586975 RLFQ13129 1914 aa22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 RANBP6O60518 1105 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 HABP4Q5JVS0 413 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 SLFN13Q68D06 897 aa22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 ZNF589Q86UQ0 364 aaPredicted RBP22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 RIOX2Q8IUF8 465 aa22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 PRPF38AQ8NAV1 312 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 C11orf49Q9H6J7 331 aa22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 STX8Q9UNK0 236 aa22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 COLQQ9Y215 455 aaPredicted RBP22.59■■□□□ 1.21
CLPTM1-206ENST00000586975 A0A0G2JMZ2 1700 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 ZBED4O75132 1171 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 SLC34A2O95436 690 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 FGAP02671 866 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 RRP12Q5JTH9 1297 aaKnown RBP22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 LHX8Q68G74 356 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 CHRDL2Q6WN34 429 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 ABRAQ8N0Z2 381 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 CPXCR1Q8N123 301 aa22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 ZNF214Q9UL59 606 aaPredicted RBP22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 GREB1LQ9C091 1923 aaPredicted RBP22.58■■□□□ 1.21
CLPTM1-206ENST00000586975 NMT2O60551 498 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 PGK2P07205 417 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 HSPD1P10809 573 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 BMP3P12645 472 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 SDSP20132 328 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 MNX1P50219 401 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 KCTD2Q14681 263 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 ALX1Q15699 326 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 SNRNP48Q6IEG0 339 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 REPS2Q8NFH8 660 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 DDX20Q9UHI6 824 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 ANAPC4Q9UJX5 808 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 PLIN4Q96Q06 1357 aa22.57■■□□□ 1.2
CLPTM1-206ENST00000586975 HAND2P61296 217 aa22.56■■□□□ 1.2
CLPTM1-206ENST00000586975 IKQ13123 557 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-206ENST00000586975 OLFML2BQ68BL8 750 aa22.56■■□□□ 1.2
CLPTM1-206ENST00000586975 TICAM2Q86XR7 235 aa22.56■■□□□ 1.2
CLPTM1-206ENST00000586975 GMCL1P1Q8NEA9 526 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms