RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 GBF1Q92538 1859 aa22.05■■□□□ 1.12
TOP3A-220ENST00000585031 PGK2P07205 417 aa22.04■■□□□ 1.12
TOP3A-220ENST00000585031 TRIM27P14373 513 aa22.04■■□□□ 1.12
TOP3A-220ENST00000585031 TOX2Q96NM4 488 aa22.04■■□□□ 1.12
TOP3A-220ENST00000585031 MROH8Q9H579 483 aa22.04■■□□□ 1.12
TOP3A-220ENST00000585031 ADAMTS4O75173 837 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 ZNF865P0CJ78 1059 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-220ENST00000585031 IRX5P78411 483 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-220ENST00000585031 ADGRE1Q14246 886 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 TMEM132BQ14DG7 1078 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 RASIP1Q5U651 963 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 ANKRD33Q7Z3H0 272 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 SLC44A5Q8NCS7 719 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 EAF2Q96CJ1 260 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-220ENST00000585031 SLC5A4Q9NY91 659 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 ARIH1Q9Y4X5 557 aaPredicted RBP22.03■■□□□ 1.12
TOP3A-220ENST00000585031 MYH8P13535 1937 aa22.03■■□□□ 1.12
TOP3A-220ENST00000585031 MPHOSPH10O00566 681 aaKnown RBP22.02■■□□□ 1.12
TOP3A-220ENST00000585031 IGSF3O75054 1194 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 BCAR3O75815 825 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 RARBP10826 455 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 SPICE1Q8N0Z3 855 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 SSH3Q8TE77 659 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 PBX4Q9BYU1 374 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 PRDM12Q9H4Q4 367 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 NRBP1Q9UHY1 535 aa22.02■■□□□ 1.12
TOP3A-220ENST00000585031 SMIM22K7EJ46 135 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 FLOT1O75955 427 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 CYP2D6P10635 497 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 FCER1AP12319 257 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 ZNF792Q3KQV3 632 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 TMEM240Q5SV17 173 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 RNF180Q86T96 592 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 MB21D1Q8N884 522 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 TINF2Q9BSI4 451 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 C1QTNF1Q9BXJ1 281 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 TBX21Q9UL17 535 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 SYNGAP1Q96PV0 1343 aa22.01■■□□□ 1.11
TOP3A-220ENST00000585031 TIMP1P01033 207 aa22■■□□□ 1.11
TOP3A-220ENST00000585031 POLR3DP05423 398 aaPredicted RBP22■■□□□ 1.11
TOP3A-220ENST00000585031 SAMD1Q6SPF0 538 aaPredicted RBP22■■□□□ 1.11
TOP3A-220ENST00000585031 CLUAP1Q96AJ1 413 aa22■■□□□ 1.11
TOP3A-220ENST00000585031 TRANK1O15050 2925 aa22■■□□□ 1.11
TOP3A-220ENST00000585031 MYADML2A6NDP7 307 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 SURF6O75683 361 aaKnown RBP21.99■■□□□ 1.11
TOP3A-220ENST00000585031 ACLYP53396 1101 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 ATP8B2P98198 1209 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-220ENST00000585031 CCDC85BQ15834 202 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-220ENST00000585031 CCSAPQ6IQ19 270 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-220ENST00000585031 FBXO28Q9NVF7 368 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 ADAMTS5Q9UNA0 930 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 BAZ2AQ9UIF9 1905 aaKnown RBP21.99■■□□□ 1.11
TOP3A-220ENST00000585031 MCM3APO60318 1980 aa21.99■■□□□ 1.11
TOP3A-220ENST00000585031 BMP1P13497 986 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 MFSD5Q6N075 450 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 KLHDC9Q8NEP7 349 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 MMP19Q99542 508 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 TSEN34Q9BSV6 310 aaKnown RBP21.98■■□□□ 1.11
TOP3A-220ENST00000585031 ROBO3Q96MS0 1386 aa21.98■■□□□ 1.11
TOP3A-220ENST00000585031 DCDC2CA8MYV0 355 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 ACRP10323 421 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 AKR1B1P15121 316 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 CERS3Q8IU89 383 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 TMX2Q9Y320 296 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 SYNRGQ9UMZ2 1314 aa21.97■■□□□ 1.11
TOP3A-220ENST00000585031 CDK7P50613 346 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 KCNA10Q16322 511 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 TMEM57Q8N5G2 664 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 SDR42E1Q8WUS8 393 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 NECAB3Q96P71 396 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-220ENST00000585031 VCPKMTQ9H867 229 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 STARD7Q9NQZ5 370 aa21.96■■□□□ 1.11
TOP3A-220ENST00000585031 CXXC1Q9P0U4 656 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-220ENST00000585031 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
TOP3A-220ENST00000585031 MAGEB6P1A0A0J9YX57 407 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 ADCY6O43306 1168 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 SLC25A27O95847 323 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 AKR1A1P14550 325 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 CSF2RAP15509 400 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 CCDC129Q6ZRS4 1044 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 TMEM179Q6ZVK1 233 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 RIOX2Q8IUF8 465 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 REPS2Q8NFH8 660 aa21.95■■□□□ 1.1
TOP3A-220ENST00000585031 DCP1AQ9NPI6 582 aaPredicted RBP21.95■■□□□ 1.1
TOP3A-220ENST00000585031 PIEZO1Q92508 2521 aa21.94■■□□□ 1.1
TOP3A-220ENST00000585031 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
TOP3A-220ENST00000585031 SNAI1O95863 264 aaPredicted RBP21.94■■□□□ 1.1
TOP3A-220ENST00000585031 PPIGQ13427 754 aaKnown RBP eCLIP21.94■■□□□ 1.11e-6■■■■□ 25.5
TOP3A-220ENST00000585031 ZNF365Q70YC5 407 aa21.94■■□□□ 1.1
TOP3A-220ENST00000585031 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
TOP3A-220ENST00000585031 FRAT1Q92837 279 aaPredicted RBP21.94■■□□□ 1.1
TOP3A-220ENST00000585031 ZNF214Q9UL59 606 aaPredicted RBP21.94■■□□□ 1.1
TOP3A-220ENST00000585031 DIS3Q9Y2L1 958 aaKnown RBP21.94■■□□□ 1.1
TOP3A-220ENST00000585031 IGFBP4P22692 258 aa21.93■■□□□ 1.1
TOP3A-220ENST00000585031 CCDC174Q6PII3 467 aa21.93■■□□□ 1.1
TOP3A-220ENST00000585031 VWA5AO00534 786 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms