RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TRPV1Q8NER1 839 aa24.42■■□□□ 1.5
TOP3A-219ENST00000584887 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.42■■□□□ 1.5
TOP3A-219ENST00000584887 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
TOP3A-219ENST00000584887 ZNF236Q9UL36 1845 aa24.42■■□□□ 1.5
TOP3A-219ENST00000584887 MSCO60682 206 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 PRDM1O75626 825 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 COL6A1P12109 1028 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 FCER1AP12319 257 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 CYBAP13498 195 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 OLFML2BQ68BL8 750 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 NUP88Q99567 741 aaPredicted RBP24.41■■□□□ 1.5
TOP3A-219ENST00000584887 ROBO3Q96MS0 1386 aa24.41■■□□□ 1.5
TOP3A-219ENST00000584887 FRMPD3Q5JV73 1810 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 LRRC26Q2I0M4 334 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 PI4K2BQ8TCG2 481 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 MMP19Q99542 508 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 PPP1R9AQ9ULJ8 1098 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 PARP14Q460N5 1801 aa24.4■■□□□ 1.5
TOP3A-219ENST00000584887 SLC25A27O95847 323 aa24.39■■□□□ 1.49
TOP3A-219ENST00000584887 MYCNP04198 464 aaPredicted RBP24.39■■□□□ 1.49
TOP3A-219ENST00000584887 MX1P20591 662 aa24.39■■□□□ 1.49
TOP3A-219ENST00000584887 ANO1Q5XXA6 986 aa24.39■■□□□ 1.49
TOP3A-219ENST00000584887 ZNF444Q8N0Y2 327 aaPredicted RBP24.39■■□□□ 1.49
TOP3A-219ENST00000584887 CRBNQ96SW2 442 aa24.39■■□□□ 1.49
TOP3A-219ENST00000584887 SEC62Q99442 399 aaKnown RBP24.39■■□□□ 1.49
TOP3A-219ENST00000584887 NACAP1Q9BZK3 213 aa24.39■■□□□ 1.49
TOP3A-219ENST00000584887 SENP6Q9GZR1 1112 aaPredicted RBP24.39■■□□□ 1.49
TOP3A-219ENST00000584887 COL11A1P12107 1806 aaPredicted RBP24.38■■□□□ 1.49
TOP3A-219ENST00000584887 A0A1W2PPC1 479 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 VWA5AO00534 786 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 MAGEA10P43363 369 aaPredicted RBP24.38■■□□□ 1.49
TOP3A-219ENST00000584887 ABRAQ8N0Z2 381 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 GDF15Q99988 308 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 ZNF287Q9HBT7 754 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 NYAP2Q9P242 653 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 CLIP2Q9UDT6 1046 aa24.38■■□□□ 1.49
TOP3A-219ENST00000584887 PATL2C9JE40 543 aaKnown RBP24.37■■□□□ 1.49
TOP3A-219ENST00000584887 NDUFB10O96000 172 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 STAT3P40763 770 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 PRAMEF19Q5SWL8 479 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 RIOX2Q8IUF8 465 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 IFNL3Q8IZI9 196 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 SLF1Q9BQI6 1058 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 ADAMTS5Q9UNA0 930 aa24.37■■□□□ 1.49
TOP3A-219ENST00000584887 GREB1LQ9C091 1923 aaPredicted RBP24.37■■□□□ 1.49
TOP3A-219ENST00000584887 IGHA2P01877 340 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 PGK2P07205 417 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 SLC4A3P48751 1232 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 ATN1P54259 1190 aaPredicted RBP24.36■■□□□ 1.49
TOP3A-219ENST00000584887 KCTD2Q14681 263 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 GJC2Q5T442 439 aaPredicted RBP24.36■■□□□ 1.49
TOP3A-219ENST00000584887 ANKRD45Q5TZF3 282 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 MAML3Q96JK9 1138 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 NAPBQ9H115 298 aa24.36■■□□□ 1.49
TOP3A-219ENST00000584887 F5H6K3 240 aa24.35■■□□□ 1.49
TOP3A-219ENST00000584887 KLRC3Q07444 240 aa24.35■■□□□ 1.49
TOP3A-219ENST00000584887 ISY1Q9ULR0 285 aaKnown RBP24.35■■□□□ 1.49
TOP3A-219ENST00000584887 CTDP1Q9Y5B0 961 aaPredicted RBP24.35■■□□□ 1.49
TOP3A-219ENST00000584887 RANBP2P49792 3224 aaKnown RBP24.35■■□□□ 1.49
TOP3A-219ENST00000584887 DNM1LO00429 736 aa24.34■■□□□ 1.49
TOP3A-219ENST00000584887 SOX1O00570 391 aaPredicted RBP24.34■■□□□ 1.49
TOP3A-219ENST00000584887 SEPT4O43236 478 aa24.34■■□□□ 1.49
TOP3A-219ENST00000584887 ZMYM1Q5SVZ6 1142 aa24.34■■□□□ 1.49
TOP3A-219ENST00000584887 LRRC47Q8N1G4 583 aaKnown RBP24.34■■□□□ 1.49
TOP3A-219ENST00000584887 CEP95Q96GE4 821 aa24.34■■□□□ 1.49
TOP3A-219ENST00000584887 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
TOP3A-219ENST00000584887 ZNF214Q9UL59 606 aaPredicted RBP24.34■■□□□ 1.49
TOP3A-219ENST00000584887 ZNFX1Q9P2E3 1918 aaKnown RBP24.33■■□□□ 1.49
TOP3A-219ENST00000584887 KBTBD13C9JR72 458 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 SLC3A2P08195 630 aaKnown RBP24.33■■□□□ 1.49
TOP3A-219ENST00000584887 TSPY3P0CV98 308 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 TSPY8P0CW00 308 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 BMP8BP34820 402 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 COPB2P35606 906 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 PDE4BQ07343 736 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 SNRNP48Q6IEG0 339 aaKnown RBP24.33■■□□□ 1.49
TOP3A-219ENST00000584887 CCDC129Q6ZRS4 1044 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 ARRDC4Q8NCT1 418 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 REPS2Q8NFH8 660 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 LRCH3Q96II8 777 aa24.33■■□□□ 1.49
TOP3A-219ENST00000584887 UBE2OQ9C0C9 1292 aaKnown RBP24.33■■□□□ 1.49
TOP3A-219ENST00000584887 MYH4Q9Y623 1939 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 IGKV6D-41A0A0C4DH26 115 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 PPARAQ07869 468 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 FAM47AQ5JRC9 791 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 CPXCR1Q8N123 301 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 KIFC2Q96AC6 838 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 TEX13BQ9BXU2 312 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 MTMR4Q9NYA4 1195 aa24.32■■□□□ 1.48
TOP3A-219ENST00000584887 TTLL1O95922 423 aa24.31■■□□□ 1.48
TOP3A-219ENST00000584887 MDM2Q00987 491 aaPredicted RBP24.31■■□□□ 1.48
TOP3A-219ENST00000584887 ZBED4O75132 1171 aa24.3■■□□□ 1.48
TOP3A-219ENST00000584887 RTP1P59025 263 aa24.3■■□□□ 1.48
TOP3A-219ENST00000584887 TFAP4Q01664 338 aa24.3■■□□□ 1.48
TOP3A-219ENST00000584887 PRPF38AQ8NAV1 312 aaKnown RBP24.3■■□□□ 1.48
TOP3A-219ENST00000584887 CHMP4CQ96CF2 233 aa24.3■■□□□ 1.48
TOP3A-219ENST00000584887 ATP11BQ9Y2G3 1177 aa24.3■■□□□ 1.48
TOP3A-219ENST00000584887 ZNF792Q3KQV3 632 aa24.29■■□□□ 1.48
TOP3A-219ENST00000584887 NEDD1Q8NHV4 660 aa24.29■■□□□ 1.48
TOP3A-219ENST00000584887 DDX11Q96FC9 970 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms