RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NYAP2Q9P242 653 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 F5H6K3 240 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ADORA2AP29274 412 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CCND3P30281 292 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TFAP4Q01664 338 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CTDSPL2Q05D32 466 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 KLRC3Q07444 240 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MFSD14CQ5VZR4 134 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SHCBP1Q8NEM2 672 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 FAM227BQ96M60 508 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MROH8Q9H579 483 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
CDK5RAP3-233ENST00000584186 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 FOXP2O15409 715 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 STRNO43815 780 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NDUFB10O96000 172 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CAPN2P17655 700 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NUCB1Q02818 461 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NECAB2Q7Z6G3 386 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 LRRC47Q8N1G4 583 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NPLOC4Q8TAT6 608 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PPP1R9AQ9ULJ8 1098 aa16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-233ENST00000584186 RLFQ13129 1914 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 VWA5AO00534 786 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 TTLL1O95922 423 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CNGA1P29973 690 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CYP2C19P33261 490 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLF1Q9BQI6 1058 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 A0A0G2JMZ2 1700 aa16.19■□□□□ 0.18
CDK5RAP3-233ENST00000584186 GREB1LQ9C091 1923 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 EVI5O60447 810 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 HOXC6P09630 235 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 FCER1AP12319 257 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 STAT3P40763 770 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLC4A3P48751 1232 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NMIQ13287 307 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ANKLE1Q8NAG6 615 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 OGDHLQ9ULD0 1010 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ADAMTS5Q9UNA0 930 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
CDK5RAP3-233ENST00000584186 TSPY2A6NKD2 308 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 COBLO75128 1261 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLC25A27O95847 323 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MKL1Q969V6 931 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MMP19Q99542 508 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLC5A4Q9NY91 659 aa16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CTDP1Q9Y5B0 961 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-233ENST00000584186 RANBP6O60518 1105 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 HABP4Q5JVS0 413 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 LHX8Q68G74 356 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 RIOX2Q8IUF8 465 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ABRAQ8N0Z2 381 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 C11orf49Q9H6J7 331 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 STX8Q9UNK0 236 aa16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDK5RAP3-233ENST00000584186 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PLIN4Q96Q06 1357 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 NMT2O60551 498 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ZBED4O75132 1171 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SLC34A2O95436 690 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 FGAP02671 866 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 PGK2P07205 417 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SDSP20132 328 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 KCTD2Q14681 263 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 ALX1Q15699 326 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 GMCL1P1Q8NEA9 526 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-233ENST00000584186 MYH4Q9Y623 1939 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 HSPD1P10809 573 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 BMP3P12645 472 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 HAND2P61296 217 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms