RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 TNNQ9UQP3 1299 aa10.62□□□□□ -0.71
NUP85-223ENST00000583877 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
NUP85-223ENST00000583877 TMEM265A0A087WTH1 108 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 COBLO75128 1261 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 PPP1R37O75864 691 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 ERCC3P19447 782 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 ADCYAP1R1P41586 468 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 GABPAQ06546 454 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 SEPT2Q15019 361 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 LRRC41Q15345 812 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 ANO1Q5XXA6 986 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 MB21D1Q8N884 522 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
NUP85-223ENST00000583877 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
NUP85-223ENST00000583877 TANGO6Q9C0B7 1094 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
NUP85-223ENST00000583877 MROH8Q9H579 483 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
NUP85-223ENST00000583877 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
NUP85-223ENST00000583877 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
NUP85-223ENST00000583877 XIRP2A4UGR9 3374 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 A0A1W2PRG0 241 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 BCAR3O75815 825 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
NUP85-223ENST00000583877 FOSL2P15408 326 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
NUP85-223ENST00000583877 EAF2Q96CJ1 260 aaPredicted RBP10.6□□□□□ -0.71
NUP85-223ENST00000583877 MAML3Q96JK9 1138 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
NUP85-223ENST00000583877 NRBP1Q9UHY1 535 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
NUP85-223ENST00000583877 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
NUP85-223ENST00000583877 TLE2Q04725 743 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 PLS1Q14651 629 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 PRAMEF19Q5SWL8 479 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 NCAPG2Q86XI2 1143 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 ANTXR1Q9H6X2 564 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
NUP85-223ENST00000583877 TCF20Q9UGU0 1960 aaKnown RBP10.59□□□□□ -0.71
NUP85-223ENST00000583877 ROBO3Q96MS0 1386 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 KIAA0355O15063 1070 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 FLOT1O75955 427 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 SLC25A27O95847 323 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 CLTBP09497 229 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 RARBP10826 455 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 FCER1AP12319 257 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 KIAA1755Q5JYT7 1200 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 RNF180Q86T96 592 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 RNPC3Q96LT9 517 aaKnown RBP10.58□□□□□ -0.72
NUP85-223ENST00000583877 CRNKL1Q9BZJ0 848 aaKnown RBP10.58□□□□□ -0.72
NUP85-223ENST00000583877 XPNPEP3Q9NQH7 507 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 MCM9Q9NXL9 1143 aa10.58□□□□□ -0.72
NUP85-223ENST00000583877 RAG1P15918 1043 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 ITGB8P26012 769 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 TTF1Q15361 905 aaPredicted RBP10.57□□□□□ -0.72
NUP85-223ENST00000583877 ATG4CQ96DT6 458 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 SH2D4AQ9H788 454 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
NUP85-223ENST00000583877 A0A1W2PQ45 241 aaPredicted RBP10.56□□□□□ -0.72
NUP85-223ENST00000583877 A0A1W2PQY0 241 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
NUP85-223ENST00000583877 PGK1P00558 417 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 PDE6AP16499 860 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 EPHB4P54760 987 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 EVX2Q03828 476 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 FPGSQ05932 587 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 TMEM132BQ14DG7 1078 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 SLC9C2Q5TAH2 1124 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 ERC1Q8IUD2 1116 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 SIAH1Q8IUQ4 282 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 SPICE1Q8N0Z3 855 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 TOX2Q96NM4 488 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 MMP19Q99542 508 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 DCP1AQ9NPI6 582 aaPredicted RBP10.56□□□□□ -0.72
NUP85-223ENST00000583877 ADAMTS5Q9UNA0 930 aa10.56□□□□□ -0.72
NUP85-223ENST00000583877 DIS3Q9Y2L1 958 aaKnown RBP10.56□□□□□ -0.72
NUP85-223ENST00000583877 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.55□□□□□ -0.72
NUP85-223ENST00000583877 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.55□□□□□ -0.72
NUP85-223ENST00000583877 PQBP1O60828 265 aaKnown RBP10.55□□□□□ -0.72
NUP85-223ENST00000583877 AKR1A1P14550 325 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 DNAJB2P25686 324 aa10.55□□□□□ -0.72
NUP85-223ENST00000583877 ICA1Q05084 483 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms