RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MYH7P12883 1935 aa24.65■■□□□ 1.54
SRSF1-206ENST00000583741 PLXNA1Q9UIW2 1896 aa24.65■■□□□ 1.54
SRSF1-206ENST00000583741 MYCNP04198 464 aaPredicted RBP24.64■■□□□ 1.54
SRSF1-206ENST00000583741 SNX17Q15036 470 aa24.64■■□□□ 1.54
SRSF1-206ENST00000583741 TRIM60Q495X7 471 aa24.64■■□□□ 1.54
SRSF1-206ENST00000583741 BCL11AQ9H165 835 aa24.64■■□□□ 1.54
SRSF1-206ENST00000583741 VCPKMTQ9H867 229 aa24.64■■□□□ 1.54
SRSF1-206ENST00000583741 SPTBN5Q9NRC6 3674 aaKnown RBP24.64■■□□□ 1.53
SRSF1-206ENST00000583741 CYP2D7A0A087X1C5 515 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 MBD4O95243 580 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 SAMD1Q6SPF0 538 aaPredicted RBP24.64■■□□□ 1.53
SRSF1-206ENST00000583741 ABRAQ8N0Z2 381 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 KIF1BPQ96EK5 621 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 MAML3Q96JK9 1138 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 ARHGEF10LQ9HCE6 1279 aa24.64■■□□□ 1.53
SRSF1-206ENST00000583741 PRDM5Q9NQX1 630 aaPredicted RBP24.64■■□□□ 1.53
SRSF1-206ENST00000583741 CHGBP05060 677 aa24.63■■□□□ 1.53
SRSF1-206ENST00000583741 IFIT2P09913 472 aaKnown RBP24.63■■□□□ 1.53
SRSF1-206ENST00000583741 TMEM132BQ14DG7 1078 aa24.63■■□□□ 1.53
SRSF1-206ENST00000583741 SHHQ15465 462 aa24.63■■□□□ 1.53
SRSF1-206ENST00000583741 FAM47AQ5JRC9 791 aa24.63■■□□□ 1.53
SRSF1-206ENST00000583741 C9orf50Q5SZB4 431 aa24.63■■□□□ 1.53
SRSF1-206ENST00000583741 ADD2P35612 726 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 ADCYAP1R1P41586 468 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 LRRC41Q15345 812 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 SIRT2Q8IXJ6 389 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 FERMT2Q96AC1 680 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 RWDD1Q9H446 243 aaPredicted RBP24.62■■□□□ 1.53
SRSF1-206ENST00000583741 SH2D4AQ9H788 454 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 PDLIM7Q9NR12 457 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 PAG1Q9NWQ8 432 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 SLC5A4Q9NY91 659 aa24.62■■□□□ 1.53
SRSF1-206ENST00000583741 WDR46O15213 610 aaKnown RBP24.61■■□□□ 1.53
SRSF1-206ENST00000583741 SH3RF1Q7Z6J0 888 aa24.61■■□□□ 1.53
SRSF1-206ENST00000583741 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.61■■□□□ 1.53
SRSF1-206ENST00000583741 BADQ92934 168 aa24.61■■□□□ 1.53
SRSF1-206ENST00000583741 ATP8A2Q9NTI2 1148 aa24.61■■□□□ 1.53
SRSF1-206ENST00000583741 FCER1AP12319 257 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 CDK8P49336 464 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 ZNF697Q5TEC3 545 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 C12orf60Q5U649 245 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 RPAP2Q8IXW5 612 aaPredicted RBP24.6■■□□□ 1.53
SRSF1-206ENST00000583741 COL25A1Q9BXS0 654 aaPredicted RBP24.6■■□□□ 1.53
SRSF1-206ENST00000583741 FBXO28Q9NVF7 368 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 ADAMTS5Q9UNA0 930 aa24.6■■□□□ 1.53
SRSF1-206ENST00000583741 TRIM43BA6NCK2 446 aa24.59■■□□□ 1.53
SRSF1-206ENST00000583741 HDAC1Q13547 482 aaPredicted RBP24.59■■□□□ 1.53
SRSF1-206ENST00000583741 TRIM43Q96BQ3 446 aaPredicted RBP24.59■■□□□ 1.53
SRSF1-206ENST00000583741 BOLA2Q9H3K6 86 aa24.59■■□□□ 1.53
SRSF1-206ENST00000583741 GREB1LQ9C091 1923 aaPredicted RBP24.58■■□□□ 1.53
SRSF1-206ENST00000583741 USP17L12C9JPN9 530 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 USP17L21D6R901 530 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 IGHDP01880 384 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 PGK2P07205 417 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 EEF2P13639 858 aaKnown RBP24.58■■□□□ 1.53
SRSF1-206ENST00000583741 C1orf53Q5VUE5 145 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 C16orf86Q6ZW13 317 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 CENPQQ7L2Z9 268 aaPredicted RBP24.58■■□□□ 1.53
SRSF1-206ENST00000583741 CCDC17Q96LX7 622 aa24.58■■□□□ 1.53
SRSF1-206ENST00000583741 SLC25A27O95847 323 aa24.58■■□□□ 1.52
SRSF1-206ENST00000583741 MMP19Q99542 508 aa24.58■■□□□ 1.52
SRSF1-206ENST00000583741 ATP5JP18859 108 aa24.57■■□□□ 1.52
SRSF1-206ENST00000583741 XPNPEP3Q9NQH7 507 aa24.57■■□□□ 1.52
SRSF1-206ENST00000583741 PHF24Q9UPV7 400 aa24.57■■□□□ 1.52
SRSF1-206ENST00000583741 HMMRO75330 724 aa24.56■■□□□ 1.52
SRSF1-206ENST00000583741 TAL1P17542 331 aaPredicted RBP24.56■■□□□ 1.52
SRSF1-206ENST00000583741 ITGB8P26012 769 aa24.56■■□□□ 1.52
SRSF1-206ENST00000583741 TLE2Q04725 743 aa24.56■■□□□ 1.52
SRSF1-206ENST00000583741 RIOX2Q8IUF8 465 aa24.56■■□□□ 1.52
SRSF1-206ENST00000583741 CDX2Q99626 313 aaPredicted RBP24.56■■□□□ 1.52
SRSF1-206ENST00000583741 HAUS7Q99871 368 aa24.56■■□□□ 1.52
SRSF1-206ENST00000583741 ROBO3Q96MS0 1386 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 VWA5AO00534 786 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 PGK1P00558 417 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 ZNF792Q3KQV3 632 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 REPS2Q8NFH8 660 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 LENG1Q96BZ8 264 aaPredicted RBP24.55■■□□□ 1.52
SRSF1-206ENST00000583741 TINF2Q9BSI4 451 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.55■■□□□ 1.52
SRSF1-206ENST00000583741 KANSL2Q9H9L4 492 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 NRBP1Q9UHY1 535 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 ZNF214Q9UL59 606 aaPredicted RBP24.55■■□□□ 1.52
SRSF1-206ENST00000583741 PPP1R9AQ9ULJ8 1098 aa24.55■■□□□ 1.52
SRSF1-206ENST00000583741 RARBP10826 455 aa24.54■■□□□ 1.52
SRSF1-206ENST00000583741 AMOTL1Q8IY63 956 aa24.54■■□□□ 1.52
SRSF1-206ENST00000583741 SEMA6BQ9H3T3 888 aa24.54■■□□□ 1.52
SRSF1-206ENST00000583741 SLC4A4Q9Y6R1 1079 aa24.54■■□□□ 1.52
SRSF1-206ENST00000583741 RAB11FIP3O75154 756 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 STAT3P40763 770 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 KCTD2Q14681 263 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 UBE3CQ15386 1083 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 FAM83BQ5T0W9 1011 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 CTR9Q6PD62 1173 aa24.53■■□□□ 1.52
SRSF1-206ENST00000583741 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.53■■□□□ 1.52
SRSF1-206ENST00000583741 TTYH1Q9H313 450 aaPredicted RBP24.53■■□□□ 1.52
SRSF1-206ENST00000583741 RAD21O60216 631 aa24.52■■□□□ 1.52
SRSF1-206ENST00000583741 ZNF865P0CJ78 1059 aaPredicted RBP24.52■■□□□ 1.52
SRSF1-206ENST00000583741 PUS7LQ9H0K6 701 aaKnown RBP24.52■■□□□ 1.52
SRSF1-206ENST00000583741 GOPCQ9HD26 462 aa24.52■■□□□ 1.52
SRSF1-206ENST00000583741 DIS3Q9Y2L1 958 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms