RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.87	□□□□□ -0.19
STRADA-222	ENST00000583085	FANCC	Q00597	558 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	ZNF579	Q8NAF0	562 aa	Known RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	DBNDD1	Q9H9R9	158 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	TTF2	Q9UNY4	1162 aa	Known RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	LRRC37A	A6NMS7	1700 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	GAK	O14976	1311 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	COL11A2	P13942	1736 aa	Predicted RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	KLRF2	D3W0D1	207 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	COBL	O75128	1261 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	MYL5	Q02045	173 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	GOLGA8F	Q08AF8	430 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	GOLGA8DP	Q0D2H9	430 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	DPP8	Q6V1X1	898 aa	Predicted RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	BLID	Q8IZY5	108 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	IPO4	Q8TEX9	1081 aa	Known RBP	13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	MED15	Q96RN5	788 aa		13.86	□□□□□ -0.19
STRADA-222	ENST00000583085	ZBTB22	O15209	634 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	TMED8	Q6PL24	325 aa	Predicted RBP	13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	ANKS1A	Q92625	1134 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	UBA5	Q9GZZ9	404 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	TMEM232	C9JQI7	657 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	SKIL	P12757	684 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	CACNB3	P54284	484 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	NLGN1	Q8N2Q7	840 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	SMARCE1	Q969G3	411 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	SMTNL1	A8MU46	457 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	VGLL3	A8MV65	326 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	CCZ1B	P86790	482 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	CCZ1	P86791	482 aa	Predicted RBP	13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	ATP2C1	P98194	919 aa	Predicted RBP	13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	LRRC47	Q8N1G4	583 aa	Known RBP	13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	TBC1D22A	Q8WUA7	517 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	BLZF1	Q9H2G9	400 aa		13.85	□□□□□ -0.19
STRADA-222	ENST00000583085	PALM3	A6NDB9	673 aa	Predicted RBP	13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	USP17L5	A8MUK1	530 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	INF2	Q27J81	1249 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	TRMT1	Q9NXH9	659 aa	Known RBP	13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	IKBKB	O14920	756 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	SERPINC1	P01008	464 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	TPM2	P07951	284 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	SARS	P49591	514 aa	Known RBP	13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	ARMCX5	Q6P1M9	558 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	FAM163A	Q96GL9	167 aa	Predicted RBP	13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	TCP11L1	Q9NUJ3	509 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	PCDHA4	Q9UN74	947 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	PP2D1	A8MPX8	630 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	KLHL10	Q6JEL2	608 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	NEDD1	Q8NHV4	660 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	PAGE5	Q96GU1	130 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	COA1	Q9GZY4	146 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	PCDHA6	Q9UN73	950 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	PCDHA8	Q9Y5H6	950 aa		13.84	□□□□□ -0.19
STRADA-222	ENST00000583085	STXBP3	O00186	592 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	AKR1B1	P15121	316 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	NPR1	P16066	1061 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	NFIA	Q12857	509 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	MORC3	Q14149	939 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	ZFPM1	Q8IX07	1006 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	FAM196B	A6NMK8	535 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085		G3V3G9	751 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	PLCG2	P16885	1265 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	STX17	P56962	302 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	UBASH3A	P57075	661 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	CFAP100	Q494V2	611 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	DCAF8	Q5TAQ9	597 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	TMEM60	Q9H2L4	133 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	USP40	Q9NVE5	1235 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	PARP3	Q9Y6F1	533 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	CD44	P16070	742 aa	Known RBP	13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	TPM4	P67936	248 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	NT5DC1	Q5TFE4	455 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	FERMT2	Q96AC1	680 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	PLIN2	Q99541	437 aa		13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	SAMSN1	Q9NSI8	373 aa	Known RBP	13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	HOOK1	Q9UJC3	728 aa	Known RBP	13.83	□□□□□ -0.2
STRADA-222	ENST00000583085	FOCAD	Q5VW36	1801 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085		M0R2N6	131 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	PARP1	P09874	1014 aa	Known RBP	13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	CHRNA5	P30532	468 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	KIAA0825	Q8IV33	1275 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	PIGS	Q96S52	555 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	PRDM10	Q9NQV6	1147 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	NFE2L3	Q9Y4A8	694 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	MYH8	P13535	1937 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	SLFN14	P0C7P3	912 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	TPD52L1	Q16890	204 aa	Predicted RBP	13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	SLF2	Q8IX21	1173 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	C4orf32	Q8N8J7	132 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	MTR	Q99707	1265 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	INTS13	Q9NVM9	706 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	BARHL2	Q9NY43	387 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	CCDC194	A0A1B0GVG4	234 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	ZNF287	Q9HBT7	754 aa		13.82	□□□□□ -0.2
STRADA-222	ENST00000583085	CALML3	P27482	149 aa		13.81	□□□□□ -0.2
STRADA-222	ENST00000583085	TCP10	Q12799	353 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms