RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	FAM237A	A0A1B0GTK4	181 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	KIF28P	B7ZC32	967 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	SMIM22	K7EJ46	135 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	LAD1	O00515	517 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	PPFIA3	O75145	1194 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	PRELP	P51888	382 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	CIAPIN1	Q6FI81	312 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	PPP1R18	Q6NYC8	613 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	TATDN1	Q6P1N9	297 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	SLC44A5	Q8NCS7	719 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	ENGASE	Q8NFI3	743 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	DCAF4	Q8WV16	495 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	FAM151A	Q8WW52	585 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	GML	Q99445	158 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	DDX4	Q9NQI0	724 aa	Known RBP	11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	GINM1	Q9NU53	330 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	BARHL2	Q9NY43	387 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	USP25	Q9UHP3	1055 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	PCDHA4	Q9UN74	947 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	KCNJ14	Q9UNX9	436 aa		11.37	□□□□□ -0.59
TRIM16-222	ENST00000581224	ESYT2	A0FGR8	921 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SPDYE2B	A6NHP3	402 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	MPHOSPH10	O00566	681 aa	Known RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	NR1I2	O75469	434 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SPDYE6	P0CI01	402 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SNHG28	P0DPA3	235 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	GUCY1A2	P33402	732 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SHMT1	P34896	483 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	TNFAIP1	Q13829	316 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	PTPA	Q15257	358 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SLC4A8	Q2Y0W8	1093 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	HS1BP3	Q53T59	392 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	RBM26	Q5T8P6	1007 aa	Known RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	BLID	Q8IZY5	108 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	CMTR1	Q8N1G2	835 aa	Known RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	HOOK2	Q96ED9	719 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	PPP1R9B	Q96SB3	815 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	MXD3	Q9BW11	206 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	RBSN	Q9H1K0	784 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	RIOX1	Q9H6W3	641 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SH2D4A	Q9H788	454 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	ANO10	Q9NW15	660 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	VPS54	Q9P1Q0	977 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	CLIP2	Q9UDT6	1046 aa		11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	SRPRB	Q9Y5M8	271 aa	Known RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	GREB1L	Q9C091	1923 aa	Predicted RBP	11.36	□□□□□ -0.59
TRIM16-222	ENST00000581224	CEP350	Q5VT06	3117 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	CCDC194	A0A1B0GVG4	234 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	YDJC	A8MPS7	323 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	PSMD14	O00487	310 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	TBC1D12	O60347	775 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	PTPRE	P23469	700 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	SYK	P43405	635 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	STX1A	Q16623	288 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	ABCB5	Q2M3G0	1257 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	RESP18	Q5W5W9	173 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	KRT25	Q7Z3Z0	450 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	FAM200A	Q8TCP9	573 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	NAP1L4	Q99733	375 aa	Known RBP	11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	TDRD3	Q9H7E2	651 aa	Known RBP	11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	KCNQ5	Q9NR82	932 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	GJB4	Q9NTQ9	266 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	FAM198A	Q9UFP1	575 aa		11.35	□□□□□ -0.59
TRIM16-222	ENST00000581224	PNMA6F	A0A0J9YX94	578 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	RAD17	O75943	681 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ZNF202	O95125	648 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	PDHB	P11177	359 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	AKR1B1	P15121	316 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	EIF6	P56537	245 aa	Known RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	TPM4	P67936	248 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	TYRO3	Q06418	890 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ZNF543	Q08ER8	600 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	NFIA	Q12857	509 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	SNW1	Q13573	536 aa	Known RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	SPDYE2	Q495Y8	402 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	TPRN	Q4KMQ1	711 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	TTC38	Q5R3I4	469 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	DPF2	Q92785	391 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	PRMT6	Q96LA8	375 aa	Predicted RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	FUCA2	Q9BTY2	467 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ZMYND12	Q9H0C1	365 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ARHGEF10L	Q9HCE6	1279 aa		11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ZNF70	Q9UC06	446 aa	Predicted RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.34	□□□□□ -0.59
TRIM16-222	ENST00000581224	TXLNA	P40222	546 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	MRPL12	P52815	198 aa	Known RBP	11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	NAPA	P54920	295 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	EVX2	Q03828	476 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	CXCL9	Q07325	125 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	TCP10	Q12799	353 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	SEMA3F	Q13275	785 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	NR5A1	Q13285	461 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	CAMK4	Q16566	473 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	DPY19L2	Q6NUT2	758 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	HEATR3	Q7Z4Q2	680 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	STAG2	Q8N3U4	1231 aa		11.33	□□□□□ -0.6
TRIM16-222	ENST00000581224	GMCL1P1	Q8NEA9	526 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms