RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 NUP88Q99567 741 aaPredicted RBP17.7■□□□□ 0.42
MKS1-210ENST00000581180 CFHR5Q9BXR6 569 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
MKS1-210ENST00000581180 RNF186Q9NXI6 227 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 CYP46A1Q9Y6A2 500 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 MYH6P13533 1939 aa17.7■□□□□ 0.42
MKS1-210ENST00000581180 A0A0G2JMZ2 1700 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 SMCHD1A6NHR9 2005 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 RAD21O60216 631 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 BMP3P12645 472 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 Q6ZUG5 572 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 ASCC2Q9H1I8 757 aaPredicted RBP17.69■□□□□ 0.42
MKS1-210ENST00000581180 ADGRA2Q96PE1 1338 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 DOCK3Q8IZD9 2030 aa17.69■□□□□ 0.42
MKS1-210ENST00000581180 CA12O43570 354 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 CYP2C8P10632 490 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 OSBPP22059 807 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 SLC1A4P43007 532 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 TROAPQ12815 778 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 TAF1CQ15572 869 aaPredicted RBP17.68■□□□□ 0.42
MKS1-210ENST00000581180 SAGE1Q9NXZ1 904 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 PNMA3Q9UL41 463 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 MTMR7Q9Y216 660 aa17.68■□□□□ 0.42
MKS1-210ENST00000581180 TRPA1O75762 1119 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
MKS1-210ENST00000581180 ZNF543Q08ER8 600 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 CRHR2Q13324 411 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
MKS1-210ENST00000581180 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 PARK7Q99497 189 aaKnown RBP17.67■□□□□ 0.42
MKS1-210ENST00000581180 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
MKS1-210ENST00000581180 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
MKS1-210ENST00000581180 R3HDMLQ9H3Y0 253 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
MKS1-210ENST00000581180 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 SPDYE16A6NNV3 312 aaPredicted RBP17.66■□□□□ 0.42
MKS1-210ENST00000581180 PLA2G6O60733 806 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 DSG3P32926 999 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 COG2Q14746 738 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 LBX2Q6XYB7 198 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 KCTD1Q719H9 257 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 BRF1Q92994 677 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 MAP3K14Q99558 947 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 ZFYVE28Q9HCC9 887 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 FEM1BQ9UK73 627 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 MGAMO43451 1857 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 MYPNQ86TC9 1320 aa17.66■□□□□ 0.42
MKS1-210ENST00000581180 TMEM232C9JQI7 657 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 TLR2O60603 784 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 FLOT1O75955 427 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 DDAH1O94760 285 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 TBC1D8O95759 1140 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 EVCP57679 992 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 HERVK_113P62684 666 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 GRM4Q14833 912 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 ADAMTS5Q9UNA0 930 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 CASP8AP2Q9UKL3 1982 aa17.65■□□□□ 0.42
MKS1-210ENST00000581180 FRMPD2Q68DX3 1309 aaPredicted RBP17.65■□□□□ 0.42
MKS1-210ENST00000581180 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
MKS1-210ENST00000581180 FGD1P98174 961 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 APOBRQ0VD83 1088 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 CCDC96Q2M329 555 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
MKS1-210ENST00000581180 C17orf99Q6UX52 265 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 FAM160B2Q86V87 743 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 SLF1Q9BQI6 1058 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 HOXC10Q9NYD6 342 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 MAD2L2Q9UI95 211 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 SLC12A7Q9Y666 1083 aa17.64■□□□□ 0.41
MKS1-210ENST00000581180 KLF18A0A0U1RQI7 1052 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 PARP1P09874 1014 aaKnown RBP17.63■□□□□ 0.41
MKS1-210ENST00000581180 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 BCRP11274 1271 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 GCLCP48506 637 aaPredicted RBP17.63■□□□□ 0.41
MKS1-210ENST00000581180 NEK4P51957 841 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 STAT2P52630 851 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 RCAN1P53805 252 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 PRPF38AQ8NAV1 312 aaKnown RBP17.63■□□□□ 0.41
MKS1-210ENST00000581180 SMCR8Q8TEV9 937 aaPredicted RBP17.63■□□□□ 0.41
MKS1-210ENST00000581180 GTF3C2Q8WUA4 911 aaPredicted RBP17.63■□□□□ 0.41
MKS1-210ENST00000581180 CHURC1Q8WUH1 139 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 ATG4CQ96DT6 458 aa17.63■□□□□ 0.41
MKS1-210ENST00000581180 BEGAINQ9BUH8 593 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms