RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 PRPF3O43395 683 aaKnown RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 PLEKHA8P1O95397 391 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 DEXIO95424 95 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 KIF5BP33176 963 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 MCM4P33991 863 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 HIRAP54198 1017 aaPredicted RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 JAG1P78504 1218 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 RESTQ13127 1097 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 RASA3Q14644 834 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 PKN1Q16512 942 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 SLC35G1Q2M3R5 365 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 CERKLQ49MI3 558 aaPredicted RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 APOBEC3FQ8IUX4 373 aaKnown RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 FAM184AQ8NB25 1140 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 DDX11Q96FC9 970 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 GBP4Q96PP9 640 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 LZTS2Q9BRK4 669 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 SPZ1Q9BXG8 430 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 VEZTQ9HBM0 779 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 HACL1Q9UJ83 578 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 STX8Q9UNK0 236 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 RLFQ13129 1914 aa9.26□□□□□ -0.93
KPNB1-210ENST00000580573 ASTN2O75129 1339 aaPredicted RBP9.26□□□□□ -0.93
KPNB1-210ENST00000580573 LOC285556D6RIA3 1793 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 FAM196BA6NMK8 535 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 DTNBO60941 627 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 DDNO94850 711 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 PDHBP11177 359 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 EPS15P42566 896 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 GNAQP50148 359 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ABCB5Q2M3G0 1257 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ZSCAN29Q8IWY8 852 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 CCDC144CPQ8IYA2 1237 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 SRBD1Q8N5C6 995 aaKnown RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 GMCL1P1Q8NEA9 526 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 CTCFLQ8NI51 663 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 NUP133Q8WUM0 1156 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 WASF1Q92558 559 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 PHKBQ93100 1093 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 SHISA4Q96DD7 197 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 DEFB129Q9H1M3 183 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ZSCAN16Q9H4T2 348 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ADARB2Q9NS39 739 aaKnown RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ZNF112Q9UJU3 913 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 NAP1L2Q9ULW6 460 aaPredicted RBP9.25□□□□□ -0.93
KPNB1-210ENST00000580573 ATP6V1DQ9Y5K8 247 aa9.25□□□□□ -0.93
KPNB1-210ENST00000580573 VPS37CA5D8V6 355 aaPredicted RBP9.24□□□□□ -0.93
KPNB1-210ENST00000580573 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 CYTH3O43739 400 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 CAP2P40123 477 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 SSRP1Q08945 709 aaKnown RBP9.24□□□□□ -0.93
KPNB1-210ENST00000580573 SHROOM1Q2M3G4 852 aaPredicted RBP9.24□□□□□ -0.93
KPNB1-210ENST00000580573 ASPRV1Q53RT3 343 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 CLEC10AQ8IUN9 316 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 TRIM22Q8IYM9 498 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 STAG2Q8N3U4 1231 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 OXER1Q8TDS5 423 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 C8orf76Q96K31 380 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 ALG1Q9BT22 464 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 SLC26A6Q9BXS9 759 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 RIOX1Q9H6W3 641 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.24□□□□□ -0.93
KPNB1-210ENST00000580573 ZBTB21Q9ULJ3 1066 aa9.24□□□□□ -0.93
KPNB1-210ENST00000580573 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
KPNB1-210ENST00000580573 GLTPD2A6NH11 291 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 UBE2Q2LH0YL09 131 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 GH2P01242 217 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 PARP1P09874 1014 aaKnown RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 EEF2P13639 858 aaKnown RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 PTMSP20962 102 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 U2AF2P26368 475 aaKnown RBP eCLIP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 ICA1Q05084 483 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 ZNF543Q08ER8 600 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 SEPT2Q15019 361 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 NPY5RQ15761 445 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 PFKFB3Q16875 520 aaPredicted RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 GPATCH4Q5T3I0 446 aaKnown RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 RBM26Q5T8P6 1007 aaKnown RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 ANGEL2Q5VTE6 544 aaKnown RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 KRT40Q6A162 431 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 ATL3Q6DD88 541 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
KPNB1-210ENST00000580573 RASGRP2Q7LDG7 609 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 BRAPQ7Z569 592 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 HOOK2Q96ED9 719 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 MTMR8Q96EF0 704 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 AIFM3Q96NN9 605 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 TRIM34Q9BYJ4 488 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
KPNB1-210ENST00000580573 GGA3Q9NZ52 723 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms