RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 TOMM22Q9NS69 142 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
SMG8-204ENST00000580498 GREB1LQ9C091 1923 aaPredicted RBP23.88■■□□□ 1.41
SMG8-204ENST00000580498 MYH4Q9Y623 1939 aa23.88■■□□□ 1.41
SMG8-204ENST00000580498 F5H6K3 240 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 KLRC3Q07444 240 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 GRB14Q14449 540 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 ALX1Q15699 326 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 ANKLE1Q8NAG6 615 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 USP6NLQ92738 828 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 DPF3Q92784 378 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 SHISA4Q96DD7 197 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 CEP95Q96GE4 821 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 SLF1Q9BQI6 1058 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 MTMR4Q9NYA4 1195 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 PPP1R9AQ9ULJ8 1098 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 PLIN4Q96Q06 1357 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 PLXNB2O15031 1838 aa23.87■■□□□ 1.41
SMG8-204ENST00000580498 CCDC171Q6TFL3 1326 aa23.86■■□□□ 1.41
SMG8-204ENST00000580498 ERCC3P19447 782 aa23.86■■□□□ 1.41
SMG8-204ENST00000580498 NMIQ13287 307 aaPredicted RBP23.86■■□□□ 1.41
SMG8-204ENST00000580498 KIAA1755Q5JYT7 1200 aa23.86■■□□□ 1.41
SMG8-204ENST00000580498 FAM227BQ96M60 508 aa23.86■■□□□ 1.41
SMG8-204ENST00000580498 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.86■■□□□ 1.41
SMG8-204ENST00000580498 TNRC18O15417 2968 aaPredicted RBP23.86■■□□□ 1.41
SMG8-204ENST00000580498 A0A0D9SFI3 127 aa23.85■■□□□ 1.41
SMG8-204ENST00000580498 RANBP6O60518 1105 aaKnown RBP23.85■■□□□ 1.41
SMG8-204ENST00000580498 FCER1AP12319 257 aa23.85■■□□□ 1.41
SMG8-204ENST00000580498 ABRAQ8N0Z2 381 aa23.85■■□□□ 1.41
SMG8-204ENST00000580498 PRPF38AQ8NAV1 312 aaKnown RBP23.85■■□□□ 1.41
SMG8-204ENST00000580498 MKL1Q969V6 931 aa23.85■■□□□ 1.41
SMG8-204ENST00000580498 ANAPC4Q9UJX5 808 aa23.85■■□□□ 1.41
SMG8-204ENST00000580498 A0A0G2JMZ2 1700 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 IGKV6D-41A0A0C4DH26 115 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 ZBED4O75132 1171 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 NDUFB10O96000 172 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 HOXC6P09630 235 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 PCP11498 1178 aaKnown RBP23.84■■□□□ 1.41
SMG8-204ENST00000580498 SDSP20132 328 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 FAM47AQ5JRC9 791 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 POTEEQ6S8J3 1075 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 GMCL1P1Q8NEA9 526 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 FEM1BQ9UK73 627 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 STX8Q9UNK0 236 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 ZMYM6O95789 1325 aa23.84■■□□□ 1.41
SMG8-204ENST00000580498 VWA5AO00534 786 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 MSCO60682 206 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 ADORA2AP29274 412 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 STAT3P40763 770 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 CTDSPL2Q05D32 466 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 IKQ13123 557 aaPredicted RBP23.83■■□□□ 1.41
SMG8-204ENST00000580498 MAP3K21Q5TCX8 1036 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 NECAB2Q7Z6G3 386 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 CRISPLD2Q9H0B8 497 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 RNF41Q9H4P4 317 aaPredicted RBP23.83■■□□□ 1.41
SMG8-204ENST00000580498 NR2E3Q9Y5X4 410 aa23.83■■□□□ 1.41
SMG8-204ENST00000580498 FDX1P10109 184 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 HSPD1P10809 573 aaKnown RBP23.82■■□□□ 1.4
SMG8-204ENST00000580498 KCTD2Q14681 263 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 TMEM132BQ14DG7 1078 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 SLFN13Q68D06 897 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 RIOX2Q8IUF8 465 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 LRRC47Q8N1G4 583 aaKnown RBP23.82■■□□□ 1.4
SMG8-204ENST00000580498 FBXO28Q9NVF7 368 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 ADAMTS5Q9UNA0 930 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 RLFQ13129 1914 aa23.82■■□□□ 1.4
SMG8-204ENST00000580498 ORC4O43929 436 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 FGAP02671 866 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 BMP3P12645 472 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 NT5C2P49902 561 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 IRX6P78412 446 aaPredicted RBP23.81■■□□□ 1.4
SMG8-204ENST00000580498 CACNB2Q08289 660 aaPredicted RBP23.81■■□□□ 1.4
SMG8-204ENST00000580498 TRIM32Q13049 653 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 CCL14Q16627 93 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 RRP12Q5JTH9 1297 aaKnown RBP23.81■■□□□ 1.4
SMG8-204ENST00000580498 VPS53Q5VIR6 699 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 CHURC1Q8WUH1 139 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 MMP19Q99542 508 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 TEX13BQ9BXU2 312 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 PARP14Q460N5 1801 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 ZNF236Q9UL36 1845 aa23.81■■□□□ 1.4
SMG8-204ENST00000580498 CNGA1P29973 690 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 SLC1A4P43007 532 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 OLFML2BQ68BL8 750 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 CWC27Q6UX04 472 aaKnown RBP23.8■■□□□ 1.4
SMG8-204ENST00000580498 MFSD6Q6ZSS7 791 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 FAM160B2Q86V87 743 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 KIFC2Q96AC6 838 aa23.8■■□□□ 1.4
SMG8-204ENST00000580498 NUP88Q99567 741 aaPredicted RBP23.8■■□□□ 1.4
SMG8-204ENST00000580498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMG8-204ENST00000580498 NBPF3Q9H094 633 aa23.79■■□□□ 1.4
SMG8-204ENST00000580498 COL11A1P12107 1806 aaPredicted RBP23.79■■□□□ 1.4
SMG8-204ENST00000580498 STAT2P52630 851 aa23.78■■□□□ 1.4
SMG8-204ENST00000580498 SNRNP48Q6IEG0 339 aaKnown RBP23.78■■□□□ 1.4
SMG8-204ENST00000580498 ZNF589Q86UQ0 364 aaPredicted RBP23.78■■□□□ 1.4
SMG8-204ENST00000580498 CTNNA3Q9UI47 895 aa23.78■■□□□ 1.4
SMG8-204ENST00000580498 ZNF213O14771 459 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 EVI5O60447 810 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 UBE2Q1Q7Z7E8 422 aa23.77■■□□□ 1.4
SMG8-204ENST00000580498 NPLOC4Q8TAT6 608 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms