RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ANGEL2Q5VTE6 544 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 SIAH1Q8IUQ4 282 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CKAP2LQ8IYA6 745 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GPC2Q8N158 579 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 UBA5Q9GZZ9 404 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 A0A0U1RQG5 324 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CYTH3O43739 400 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KRT40Q6A162 431 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TTC12Q9H892 705 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 VPS54Q9P1Q0 977 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PGAP2Q9UHJ9 254 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ZKSCAN5Q9Y2L8 839 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ELP1O95163 1332 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TOP1P11387 765 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 EEF2P13639 858 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ABCB5Q2M3G0 1257 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TRIM22Q8IYM9 498 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 DACT1Q9NYF0 836 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ECM29Q5VYK3 1845 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ADCY5O95622 1261 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TTLL1O95922 423 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CALM1P0DP23 149 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CALM2P0DP24 149 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CALM3P0DP25 149 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TEPSINQ96N21 525 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NUP62CLQ9H1M0 184 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CFAP45Q9UL16 551 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NID2Q14112 1375 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 METTL16Q86W50 562 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
CDK5RAP3-217ENST00000580287 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CNTNAP5Q8WYK1 1306 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ADAMTS3O15072 1205 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NOVP48745 357 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GRM4Q14833 912 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TTBK2Q6IQ55 1244 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FAM83AQ86UY5 434 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 RBM28Q9NW13 759 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PDHBP11177 359 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ECE1P42892 770 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 RCAN1P53805 252 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 AKAP17AQ02040 695 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GPKOWQ92917 476 aaPredicted RBP eCLIP14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CCDC17Q96LX7 622 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TNMDQ9H2S6 317 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GGA3Q9NZ52 723 aa14.61□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 SLC16A2P36021 539 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ICA1Q05084 483 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CCDC178Q5BJE1 867 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 HOMER1Q86YM7 354 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 OXER1Q8TDS5 423 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PGBD1Q96JS3 809 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NUP88Q99567 741 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 A0A087WWV3 80 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 DEXIO95424 95 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KIF5BP33176 963 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NR5A1Q13285 461 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ACER1Q8TDN7 264 aa14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 RNF26Q9BY78 433 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PLIN4Q96Q06 1357 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PRPF3O43395 683 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PARP1P09874 1014 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KIF23Q02241 960 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PRKG1Q13976 671 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 SPC24Q8NBT2 197 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GLIS2Q9BZE0 524 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 NR1I2O75469 434 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CCDC192P0DO97 292 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ZYXQ15942 572 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 USP28Q96RU2 1077 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FUCA2Q9BTY2 467 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KANSL2Q9H9L4 492 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CCDC39Q9UFE4 941 aa14.59□□□□□ -0.07
CDK5RAP3-217ENST00000580287 STK36Q9NRP7 1315 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TNNI2P48788 182 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TRIM29Q14134 588 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 NOM1Q5C9Z4 860 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 TMEM179Q6ZVK1 233 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ZNF396Q96N95 335 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 FAM13BQ9NYF5 915 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 ME1P48163 572 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 CABP5Q9NP86 173 aa14.58□□□□□ -0.08
CDK5RAP3-217ENST00000580287 UQCRHLA0A096LP55 91 aa14.57□□□□□ -0.08
CDK5RAP3-217ENST00000580287 UQCRHP07919 91 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms