RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IGHA2P01877 340 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 CYP2D6P10635 497 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 RARBP10826 455 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 CDK8P49336 464 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-214ENST00000580073 KCTD2Q14681 263 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 FAM109BQ6ICB4 259 aaPredicted RBP16.02■□□□□ 0.16
TRAF4-214ENST00000580073 SPICE1Q8N0Z3 855 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 DYNLL2Q96FJ2 89 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 MAML3Q96JK9 1138 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 ZNF287Q9HBT7 754 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 ATP11BQ9Y2G3 1177 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 DIS3Q9Y2L1 958 aaKnown RBP16.02■□□□□ 0.16
TRAF4-214ENST00000580073 SLC4A4Q9Y6R1 1079 aa16.02■□□□□ 0.16
TRAF4-214ENST00000580073 MCM3APO60318 1980 aa16.02■□□□□ 0.15
TRAF4-214ENST00000580073 IGHDP01880 384 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 LRRFIP1Q32MZ4 808 aaKnown RBP16.01■□□□□ 0.15
TRAF4-214ENST00000580073 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-214ENST00000580073 ZNF697Q5TEC3 545 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-214ENST00000580073 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 MTMR10Q9NXD2 777 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 COL6A3P12111 3177 aa16.01■□□□□ 0.15
TRAF4-214ENST00000580073 USP17L12C9JPN9 530 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 USP17L21D6R901 530 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 RAD21O60216 631 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
TRAF4-214ENST00000580073 SNX17Q15036 470 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 C1orf53Q5VUE5 145 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 SLC39A5Q6ZMH5 540 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 Q7L0L9 218 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 RNF180Q86T96 592 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
TRAF4-214ENST00000580073 PRDM5Q9NQX1 630 aaPredicted RBP16■□□□□ 0.15
TRAF4-214ENST00000580073 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
TRAF4-214ENST00000580073 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-214ENST00000580073 COBLO75128 1261 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
TRAF4-214ENST00000580073 AKR1A1P14550 325 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 TMEM132BQ14DG7 1078 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 LRRC41Q15345 812 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 CLEC10AQ8IUN9 316 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 XPNPEP3Q9NQH7 507 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 ADAMTS5Q9UNA0 930 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
TRAF4-214ENST00000580073 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-214ENST00000580073 VWA5AO00534 786 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 PRKAB2O43741 272 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 ZFYP08048 801 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-214ENST00000580073 GNAT2P19087 354 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 STAT3P40763 770 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 EVX2Q03828 476 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 TRIM60Q495X7 471 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 TEX13BQ9BXU2 312 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
TRAF4-214ENST00000580073 HDAC1Q13547 482 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-214ENST00000580073 AAMPQ13685 434 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 KIAA1755Q5JYT7 1200 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 CTR9Q6PD62 1173 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 SLF1Q9BQI6 1058 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 TINF2Q9BSI4 451 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 SYNPO2Q9UMS6 1093 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
TRAF4-214ENST00000580073 SYNGAP1Q96PV0 1343 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-214ENST00000580073 FAM83BQ5T0W9 1011 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 ANO1Q5XXA6 986 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 NUP133Q8WUM0 1156 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 PDLIM7Q9NR12 457 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 NYAP2Q9P242 653 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 ZNF214Q9UL59 606 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-214ENST00000580073 TACC3Q9Y6A5 838 aa15.96■□□□□ 0.15
TRAF4-214ENST00000580073 MROH7Q68CQ1 1323 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 ADCYAP1R1P41586 468 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 TDO2P48775 406 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 SIAH1Q8IUQ4 282 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 KBTBD3Q8NAB2 608 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 APPBP2Q92624 585 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 TSEN34Q9BSV6 310 aaKnown RBP15.95■□□□□ 0.14
TRAF4-214ENST00000580073 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
TRAF4-214ENST00000580073 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
TRAF4-214ENST00000580073 LRRC37A2A6NM11 1700 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 MOXD2PA6NHM9 499 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 SLC3A2P08195 630 aaKnown RBP15.94■□□□□ 0.14
TRAF4-214ENST00000580073 CLTBP09497 229 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 ZNF792Q3KQV3 632 aa15.94■□□□□ 0.14
TRAF4-214ENST00000580073 SNRNP48Q6IEG0 339 aaKnown RBP15.94■□□□□ 0.14
TRAF4-214ENST00000580073 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-214ENST00000580073 PRPF38AQ8NAV1 312 aaKnown RBP15.94■□□□□ 0.14
TRAF4-214ENST00000580073 DDX11Q96FC9 970 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms