RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 V9GY48 417 aaPredicted RBP7.39□□□□□ -1.23
RTTN-204ENST00000579986 C12orf42Q96LP6 360 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 ZNF341Q9BYN7 854 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 KIAA1683Q9H0B3 1180 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 ZMYND12Q9H0C1 365 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 JMJD4Q9H9V9 463 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 F5H6K3 240 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 GDF11O95390 407 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 KLRC3Q07444 240 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 KLHL40Q2TBA0 621 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 KIAA1755Q5JYT7 1200 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 DCAF15Q66K64 600 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 USP17L2Q6R6M4 530 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 CMTR1Q8N1G2 835 aaKnown RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.38□□□□□ -1.23
RTTN-204ENST00000579986 KLRG1Q96E93 195 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 SCAND2PQ9GZW5 306 aaPredicted RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 CABP5Q9NP86 173 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 GJB4Q9NTQ9 266 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 GGA3Q9NZ52 723 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 FAM237AA0A1B0GTK4 181 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 VPS37CA5D8V6 355 aaPredicted RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 H3BQV1 296 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 NDUFB10O96000 172 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 VEGFAP15692 232 aaPredicted RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 CLK2P49760 499 aaKnown RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 GHRHRQ02643 423 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 WWC2Q6AWC2 1192 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 TYW1BQ6NUM6 668 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 DPY19L2Q6NUT2 758 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 NOSTRINQ8IVI9 506 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 NAP1L2Q9ULW6 460 aaPredicted RBP7.38□□□□□ -1.23
RTTN-204ENST00000579986 CNPY2Q9Y2B0 182 aa7.38□□□□□ -1.23
RTTN-204ENST00000579986 PNMA6FA0A0J9YX94 578 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 PPP1R11O60927 126 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 USP2O75604 605 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 YEATS4O95619 227 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 LMOD1P29536 600 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 TOB1P50616 345 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 PTPAQ15257 358 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 SH3D19Q5HYK7 790 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 SCYL3Q8IZE3 742 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 LRRC47Q8N1G4 583 aaKnown RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 GPT2Q8TD30 523 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 CHAMP1Q96JM3 812 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 TRIM34Q9BYJ4 488 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 TAF1DQ9H5J8 278 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 ARHGEF10LQ9HCE6 1279 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 CFAP45Q9UL16 551 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 EPHX2P34913 555 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 KRT85P78386 507 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 CSPP1Q1MSJ5 1256 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 SUPT20HL1Q3ZLR7 823 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 SLFN13Q68D06 897 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 MCTP1Q6DN14 999 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 OTUD7BQ6GQQ9 843 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 ADGRF4Q8IZF3 695 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 LEO1Q8WVC0 666 aaPredicted RBP7.37□□□□□ -1.23
RTTN-204ENST00000579986 LPAR1Q92633 364 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 SH2D4AQ9H788 454 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 PCDHA4Q9UN74 947 aa7.37□□□□□ -1.23
RTTN-204ENST00000579986 IQCA1LA6NCM1 817 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 MPHOSPH10O00566 681 aaKnown RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 CALML3P27482 149 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 TRAPPC10P48553 1259 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 PNMA8AQ86V59 439 aaPredicted RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 LINC00301Q8NCQ3 95 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 ACER1Q8TDN7 264 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 RRP36Q96EU6 259 aaKnown RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 MAF1Q9H063 256 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 RANBP17Q9H2T7 1088 aaKnown RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 ADAMTS5Q9UNA0 930 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 GOLGA6L22H0YM25 854 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 ZBTB5O15062 677 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 ADAMTS3O15072 1205 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 PPP6R2O75170 966 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 GOLGA8HP0CJ92 632 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 XBP1P17861 261 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 PTPRAP18433 802 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 ECE1P42892 770 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 UBE2HP62256 183 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 PPP4R3CPQ6ZMV5 832 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 MIGA2Q7L4E1 593 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 DIS3L2Q8IYB7 885 aaKnown RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 ZNF396Q96N95 335 aaPredicted RBP7.36□□□□□ -1.23
RTTN-204ENST00000579986 USP28Q96RU2 1077 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 TRAK2O60296 914 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 BMP3P12645 472 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 KRT2P35908 639 aa7.36□□□□□ -1.23
RTTN-204ENST00000579986 ORC2Q13416 577 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms