RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 SH2D4AQ9H788 454 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 KANSL2Q9H9L4 492 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 SLC5A4Q9NY91 659 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 DLL1O00548 723 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 SLC25A27O95847 323 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 FCER1AP12319 257 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 FAM109BQ6ICB4 259 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 REPS2Q8NFH8 660 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 STRBPQ96SI9 672 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 FBXO28Q9NVF7 368 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
CSNK1D-210ENST00000579308 VWA5AO00534 786 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 LRRC41Q15345 812 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 RIOX2Q8IUF8 465 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 LBHD1Q9BQE6 289 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 BCL11AQ9H165 835 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 PPP1R9AQ9ULJ8 1098 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 RLFQ13129 1914 aa12.81□□□□□ -0.36
CSNK1D-210ENST00000579308 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 PGK2P07205 417 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 STAT3P40763 770 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 SBK1Q52WX2 424 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 C20orf194Q5TEA3 1177 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 MMP19Q99542 508 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 ZNF214Q9UL59 606 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 DIS3Q9Y2L1 958 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 UNC80Q8N2C7 3258 aa12.8□□□□□ -0.36
CSNK1D-210ENST00000579308 TRIM43BA6NCK2 446 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 TAL1P17542 331 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 PRKAG2Q9UGJ0 569 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
CSNK1D-210ENST00000579308 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 ZNF865P0CJ78 1059 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 RASA1P20936 1047 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 SHHQ15465 462 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 PDLIM7Q9NR12 457 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 ARPP21Q9UBL0 812 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-210ENST00000579308 A0A0G2JMZ2 1700 aa12.77□□□□□ -0.36
CSNK1D-210ENST00000579308 NAV1Q8NEY1 1877 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 F5H6K3 240 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 RARBP10826 455 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 COPB2P35606 906 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 TLE2Q04725 743 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 KLRC3Q07444 240 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 KCTD2Q14681 263 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 C9orf50Q5SZB4 431 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 BADQ92934 168 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 MKL1Q969V6 931 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 XPNPEP3Q9NQH7 507 aa12.77□□□□□ -0.37
CSNK1D-210ENST00000579308 DNAJC25-GNG10A0A024R161 153 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 NDUFB10O96000 172 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 PGK1P00558 417 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 ITGB8P26012 769 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 MAMDC4Q6UXC1 1216 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 APPBP2Q92624 585 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 SLF1Q9BQI6 1058 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 TEX13BQ9BXU2 312 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 ROBO3Q96MS0 1386 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 VCANP13611 3396 aa12.76□□□□□ -0.37
CSNK1D-210ENST00000579308 ADAMTS4O75173 837 aa12.75□□□□□ -0.37
CSNK1D-210ENST00000579308 SNAI1O95863 264 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms