RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 IGHA2P01877 340 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 ADORA2AP29274 412 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
SSH2-208ENST00000579040 PLS1Q14651 629 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 ANKRD45Q5TZF3 282 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 OLFML2BQ68BL8 750 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 TICAM2Q86XR7 235 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 IFNL3Q8IZI9 196 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 NPLOC4Q8TAT6 608 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 FLRT1Q9NZU1 646 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 STAP2Q9UGK3 403 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
SSH2-208ENST00000579040 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 SLC3A2P08195 630 aaKnown RBP13.76□□□□□ -0.21
SSH2-208ENST00000579040 COPB2P35606 906 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 FAM83BQ5T0W9 1011 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 LHX8Q68G74 356 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 ZNF444Q8N0Y2 327 aaPredicted RBP13.76□□□□□ -0.21
SSH2-208ENST00000579040 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 NAPBQ9H115 298 aa13.76□□□□□ -0.21
SSH2-208ENST00000579040 VWA5AO00534 786 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 RAD21O60216 631 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 FCER1AP12319 257 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 CYBAP13498 195 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSH2-208ENST00000579040 PDE1AP54750 535 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 PDE4BQ07343 736 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
SSH2-208ENST00000579040 PRO3102Q9H379 93 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
SSH2-208ENST00000579040 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 A0A1W2PPC1 479 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 F5H6K3 240 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 COL6A1P12109 1028 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 CYP2C19P33261 490 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 KLRC3Q07444 240 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 PPARAQ07869 468 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
SSH2-208ENST00000579040 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 MKL1Q969V6 931 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
SSH2-208ENST00000579040 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
SSH2-208ENST00000579040 DDX20Q9UHI6 824 aaKnown RBP13.74□□□□□ -0.21
SSH2-208ENST00000579040 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
SSH2-208ENST00000579040 PFASO15067 1338 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 COBLO75128 1261 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 PRDM1O75626 825 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 TTLL1O95922 423 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 NDUFB10O96000 172 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 STAT3P40763 770 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 PRPF38AQ8NAV1 312 aaKnown RBP13.73□□□□□ -0.21
SSH2-208ENST00000579040 GMCL1P1Q8NEA9 526 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
SSH2-208ENST00000579040 CLIP2Q9UDT6 1046 aa13.73□□□□□ -0.21
SSH2-208ENST00000579040 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 CNGA1P29973 690 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 KCTD2Q14681 263 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 C7orf61Q8IZ16 206 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 TRPV1Q8NER1 839 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 MMP19Q99542 508 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 NUP88Q99567 741 aaPredicted RBP13.72□□□□□ -0.21
SSH2-208ENST00000579040 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 RWDD1Q9H446 243 aaPredicted RBP13.72□□□□□ -0.21
SSH2-208ENST00000579040 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 NRBP1Q9UHY1 535 aa13.72□□□□□ -0.21
SSH2-208ENST00000579040 DIS3Q9Y2L1 958 aaKnown RBP13.72□□□□□ -0.21
SSH2-208ENST00000579040 ATP2A1O14983 1001 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 FOXP2O15409 715 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 SEPT4O43236 478 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 ALX1Q15699 326 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 CCDC129Q6ZRS4 1044 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
SSH2-208ENST00000579040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSH2-208ENST00000579040 MCM3APO60318 1980 aa13.71□□□□□ -0.22
SSH2-208ENST00000579040 DNM1LO00429 736 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 ZBED4O75132 1171 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 FDX1P10109 184 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 TFAP4Q01664 338 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSH2-208ENST00000579040 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 LNPKQ9C0E8 428 aa13.7□□□□□ -0.22
SSH2-208ENST00000579040 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
SSH2-208ENST00000579040 ZMYM6O95789 1325 aa13.69□□□□□ -0.22
SSH2-208ENST00000579040 BMP3P12645 472 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms