RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 TMEM132BQ14DG7 1078 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 GIMAP6Q6P9H5 292 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CRBNQ96SW2 442 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MMP19Q99542 508 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SENP6Q9GZR1 1112 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZNF287Q9HBT7 754 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CLIP2Q9UDT6 1046 aa11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 COBLO75128 1261 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SLC25A27O95847 323 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CYBAP13498 195 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MX1P20591 662 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ATN1P54259 1190 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 LRRC26Q2I0M4 334 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 OLFML2BQ68BL8 750 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 TRPV1Q8NER1 839 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PI4K2BQ8TCG2 481 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 NAPBQ9H115 298 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PPP1R9AQ9ULJ8 1098 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ALPK3Q96L96 1907 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
CDK5RAP3-211ENST00000578996 F5H6K3 240 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 VWA5AO00534 786 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PGK2P07205 417 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 TSPY3P0CV98 308 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 TSPY8P0CW00 308 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 COL6A1P12109 1028 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 STAT3P40763 770 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 KLRC3Q07444 240 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 KCTD2Q14681 263 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CHMP4CQ96CF2 233 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SLF1Q9BQI6 1058 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 NYAP2Q9P242 653 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
CDK5RAP3-211ENST00000578996 A0A1W2PPC1 479 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 KBTBD13C9JR72 458 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 DNM1LO00429 736 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 NDUFB10O96000 172 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MAGEA10P43363 369 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PDE4BQ07343 736 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CCDC129Q6ZRS4 1044 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 RIOX2Q8IUF8 465 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ABRAQ8N0Z2 381 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CEP95Q96GE4 821 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 GDF15Q99988 308 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 UBE2OQ9C0C9 1292 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 RLFQ13129 1914 aa10.97□□□□□ -0.65
CDK5RAP3-211ENST00000578996 RANBP2P49792 3224 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SOX1O00570 391 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SEPT4O43236 478 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZBED4O75132 1171 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 MDM2Q00987 491 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PPARAQ07869 468 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZMYM1Q5SVZ6 1142 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 CPXCR1Q8N123 301 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ARRDC4Q8NCT1 418 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 PRKAG2Q9UGJ0 569 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ADAMTS5Q9UNA0 930 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 ATP11BQ9Y2G3 1177 aa10.96□□□□□ -0.65
CDK5RAP3-211ENST00000578996 SZT2Q5T011 3432 aa10.96□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CEP290O15078 2479 aa10.96□□□□□ -0.66
CDK5RAP3-211ENST00000578996 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TTLL1O95922 423 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 BMP8BP34820 402 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 COPB2P35606 906 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TFAP4Q01664 338 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 IKQ13123 557 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TDHQ8IZJ6 230 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PRPF38AQ8NAV1 312 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 REPS2Q8NFH8 660 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TEX13BQ9BXU2 312 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 RAVER2Q9HCJ3 691 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 COL11A1P12107 1806 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 PARP14Q460N5 1801 aa10.95□□□□□ -0.66
CDK5RAP3-211ENST00000578996 GREB1LQ9C091 1923 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-211ENST00000578996 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms