RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PRDM1O75626 825 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 CYBAP13498 195 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 BMP8BP34820 402 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 ZSCAN25Q6NSZ9 544 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 SHCBP1Q8NEM2 672 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 LPAR1Q92633 364 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 DDRGK1Q96HY6 314 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 EPB41L4AQ9HCS5 686 aaPredicted RBP10.72□□□□□ -0.69
GGA3-207ENST00000578896 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 A0A0G2JMZ2 1700 aa10.72□□□□□ -0.69
GGA3-207ENST00000578896 A0A1W2PPC1 479 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 WDR46O15213 610 aaKnown RBP10.71□□□□□ -0.69
GGA3-207ENST00000578896 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
GGA3-207ENST00000578896 STRNO43815 780 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 TAL1P17542 331 aaPredicted RBP10.71□□□□□ -0.69
GGA3-207ENST00000578896 RASA1P20936 1047 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MYO9BQ13459 2157 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MB21D1Q8N884 522 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 KBTBD3Q8NAB2 608 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 FERMT2Q96AC1 680 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MAML3Q96JK9 1138 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
GGA3-207ENST00000578896 MROH8Q9H579 483 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 SH2D4AQ9H788 454 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MKNK2Q9HBH9 465 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 PLXNA1Q9UIW2 1896 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MYH4Q9Y623 1939 aa10.71□□□□□ -0.69
GGA3-207ENST00000578896 MCM3APO60318 1980 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 VWA5AO00534 786 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 GPAA1O43292 621 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 APPP05067 770 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 FCER1AP12319 257 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 STAT3P40763 770 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 RTP1P59025 263 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 REPS2Q8NFH8 660 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 APPBP2Q92624 585 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 LENG1Q96BZ8 264 aaPredicted RBP10.7□□□□□ -0.7
GGA3-207ENST00000578896 MMP19Q99542 508 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 ARPP21Q9UBL0 812 aaPredicted RBP10.7□□□□□ -0.7
GGA3-207ENST00000578896 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 PPP1R9AQ9ULJ8 1098 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 ADAMTS5Q9UNA0 930 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 ATP11BQ9Y2G3 1177 aa10.7□□□□□ -0.7
GGA3-207ENST00000578896 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
GGA3-207ENST00000578896 F5H6K3 240 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 DNM1LO00429 736 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 SEPT4O43236 478 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 MSCO60682 206 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 NDUFB10O96000 172 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 ADCYAP1R1P41586 468 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 TDO2P48775 406 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 KLRC3Q07444 240 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 SBK1Q52WX2 424 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 CPXCR1Q8N123 301 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 DEFB123Q8N688 67 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 ZNF214Q9UL59 606 aaPredicted RBP10.69□□□□□ -0.7
GGA3-207ENST00000578896 RIPK3Q9Y572 518 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 ZNF236Q9UL36 1845 aa10.69□□□□□ -0.7
GGA3-207ENST00000578896 SLC25A27O95847 323 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 PGK1P00558 417 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 LRRC41Q15345 812 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 ZNF792Q3KQV3 632 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 TRIM60Q495X7 471 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 CCDC129Q6ZRS4 1044 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 SH3RF1Q7Z6J0 888 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 IFNL3Q8IZI9 196 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 ABRAQ8N0Z2 381 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
GGA3-207ENST00000578896 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 SLF1Q9BQI6 1058 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 PRDM5Q9NQX1 630 aaPredicted RBP10.68□□□□□ -0.7
GGA3-207ENST00000578896 SLC5A4Q9NY91 659 aa10.68□□□□□ -0.7
GGA3-207ENST00000578896 IGKV6D-41A0A0C4DH26 115 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 PATL2C9JE40 543 aaKnown RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 KBTBD13C9JR72 458 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 KCTD2Q14681 263 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 LRIT3Q3SXY7 679 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 SNRNP48Q6IEG0 339 aaKnown RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 ZNF444Q8N0Y2 327 aaPredicted RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 SLC17A8Q8NDX2 589 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 CEP95Q96GE4 821 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 RAVER2Q9HCJ3 691 aaKnown RBP10.67□□□□□ -0.7
GGA3-207ENST00000578896 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
GGA3-207ENST00000578896 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms