RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 GPIHBP1Q8IV16 184 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 CDAN1Q8IWY9 1227 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 LRRC47Q8N1G4 583 aaKnown RBP9.78□□□□□ -0.84
NCOA4-201ENST00000578454 GGA3Q9NZ52 723 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 SCAF8Q9UPN6 1271 aaKnown RBP9.78□□□□□ -0.84
NCOA4-201ENST00000578454 PITPNM2Q9BZ72 1349 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
NCOA4-201ENST00000578454 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 KRT40Q6A162 431 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
NCOA4-201ENST00000578454 CLEC10AQ8IUN9 316 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
NCOA4-201ENST00000578454 AIFM3Q96NN9 605 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 ARHGEF10LQ9HCE6 1279 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 SYNPO2Q9UMS6 1093 aa9.78□□□□□ -0.84
NCOA4-201ENST00000578454 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.84
NCOA4-201ENST00000578454 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 GLTPD2A6NH11 291 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 GOLGA8HP0CJ92 632 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 PDHBP11177 359 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 CAP2P40123 477 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 RESTQ13127 1097 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 RRP1BQ14684 758 aaKnown RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SAFBQ15424 915 aaKnown RBP eCLIP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 OTUD7BQ6GQQ9 843 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 ZBTB21Q9ULJ3 1066 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 ASNSP08243 561 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SNHG28P0DPA3 235 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 GNL2Q13823 731 aaKnown RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 CSPP1Q1MSJ5 1256 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SHROOM1Q2M3G4 852 aaPredicted RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 NBPF12Q5TAG4 269 aaPredicted RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 USP50Q70EL3 339 aaPredicted RBP9.77□□□□□ -0.85
NCOA4-201ENST00000578454 DCAF4Q8WV16 495 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.85
NCOA4-201ENST00000578454 SCG2P13521 617 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 KRT85P78386 507 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 JAG1P78504 1218 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 PKN1Q16512 942 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 PFKFB3Q16875 520 aaPredicted RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 SLFN13Q68D06 897 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 BRAPQ7Z569 592 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 SIAH1Q8IUQ4 282 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 GMCL1P1Q8NEA9 526 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 ZNF341Q9BYN7 854 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 SH2D4AQ9H788 454 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 MYH4Q9Y623 1939 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 FRMPD2Q68DX3 1309 aaPredicted RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 hCG_1642624A0A1W2PR95 340 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 DCAF8L1A6NGE4 600 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 PHF20L1A8MW92 1017 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 UBE2Q2LH0YL09 131 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 CTNND1O60716 968 aaKnown RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 SLC1A4P43007 532 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 ZNF543Q08ER8 600 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 SKOR2Q2VWA4 1001 aaPredicted RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 ATL3Q6DD88 541 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 RRP36Q96EU6 259 aaKnown RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 ZNF396Q96N95 335 aaPredicted RBP9.76□□□□□ -0.85
NCOA4-201ENST00000578454 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 CFAP45Q9UL16 551 aa9.76□□□□□ -0.85
NCOA4-201ENST00000578454 MYH6P13533 1939 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 F5H6K3 240 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 MMP1P03956 469 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 EPHX2P34913 555 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 MLLT3P42568 568 aaPredicted RBP9.75□□□□□ -0.85
NCOA4-201ENST00000578454 KIF23Q02241 960 aaPredicted RBP9.75□□□□□ -0.85
NCOA4-201ENST00000578454 KLRC3Q07444 240 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 CHAMP1Q96JM3 812 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 SEC63Q9UGP8 760 aaKnown RBP9.75□□□□□ -0.85
NCOA4-201ENST00000578454 ISY1Q9ULR0 285 aaKnown RBP9.75□□□□□ -0.85
NCOA4-201ENST00000578454 CNPY2Q9Y2B0 182 aa9.75□□□□□ -0.85
NCOA4-201ENST00000578454 FAM173BQ6P4H8 233 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 USP48Q86UV5 1035 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 SCAND2PQ9GZW5 306 aaPredicted RBP9.74□□□□□ -0.85
NCOA4-201ENST00000578454 UBA5Q9GZZ9 404 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 RIOX1Q9H6W3 641 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
NCOA4-201ENST00000578454 BRMS1Q9HCU9 246 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms