RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MCM5P33992 734 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 CDK8P49336 464 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 NR6A1Q15406 480 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 TATDN1Q6P1N9 297 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
COPS3-215ENST00000578317 MB21D2Q8IYB1 491 aaPredicted RBP9.44□□□□□ -0.9
COPS3-215ENST00000578317 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 ESR2Q92731 530 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 DCPSQ96C86 337 aaKnown RBP9.44□□□□□ -0.9
COPS3-215ENST00000578317 HOOK2Q96ED9 719 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 CCDC17Q96LX7 622 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 AGXT2Q9BYV1 514 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 TMEM39BQ9GZU3 492 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 ASTN2O75129 1339 aaPredicted RBP9.44□□□□□ -0.9
COPS3-215ENST00000578317 MYH7P12883 1935 aa9.44□□□□□ -0.9
COPS3-215ENST00000578317 MYH2Q9UKX2 1941 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 MCM2P49736 904 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 NEK4P51957 841 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 Q3C1V9 767 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
COPS3-215ENST00000578317 ZNF444Q8N0Y2 327 aaPredicted RBP9.43□□□□□ -0.9
COPS3-215ENST00000578317 SNX21Q969T3 373 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
COPS3-215ENST00000578317 DYNLL2Q96FJ2 89 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 TTC14Q96N46 770 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 TCP11L1Q9NUJ3 509 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 GGA3Q9NZ52 723 aa9.43□□□□□ -0.9
COPS3-215ENST00000578317 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
COPS3-215ENST00000578317 B4E1Z4 1266 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 SHMT1P34896 483 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 NOVP48745 357 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 EVCP57679 992 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 COPS2P61201 443 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 ANKRD1Q15327 319 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 SUPT20HL1Q3ZLR7 823 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 UPF3BQ9BZI7 483 aaKnown RBP9.42□□□□□ -0.9
COPS3-215ENST00000578317 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 PDRG1Q9NUG6 133 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 RASA1P20936 1047 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 LIFRP42702 1097 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 SEMA3FQ13275 785 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 COL9A3Q14050 684 aaPredicted RBP9.42□□□□□ -0.9
COPS3-215ENST00000578317 CDC37L1Q7L3B6 337 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
COPS3-215ENST00000578317 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 IGDCC4Q8TDY8 1250 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 ANKS1AQ92625 1134 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 DNAJC18Q9H819 358 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
COPS3-215ENST00000578317 NEDD4P46934 1319 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 PRC1O43663 620 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 RANBP6O60518 1105 aaKnown RBP9.41□□□□□ -0.9
COPS3-215ENST00000578317 PRDM1O75626 825 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 ANTXR2P58335 489 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 TFAP4Q01664 338 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 NBPF12Q5TAG4 269 aaPredicted RBP9.41□□□□□ -0.9
COPS3-215ENST00000578317 CYB5R4Q7L1T6 521 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 KRT26Q7Z3Y9 468 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 LDHDQ86WU2 507 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 DGKHQ86XP1 1220 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 MTRQ99707 1265 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.41□□□□□ -0.9
COPS3-215ENST00000578317 ZNF112Q9UJU3 913 aa9.41□□□□□ -0.9
COPS3-215ENST00000578317 WDR90Q96KV7 1748 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 IGKV6D-41A0A0C4DH26 115 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 TSPY2A6NKD2 308 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 NR1I2O75469 434 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 CPA1P15085 419 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 SLC4A8Q2Y0W8 1093 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 CERKLQ49MI3 558 aaPredicted RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 RRP12Q5JTH9 1297 aaKnown RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 DCAF15Q66K64 600 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 SGMS1Q86VZ5 419 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 STK11IPQ8N1F8 1099 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 UCN2Q96RP3 112 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 TOMM22Q9NS69 142 aa9.4□□□□□ -0.9
COPS3-215ENST00000578317 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.9
COPS3-215ENST00000578317 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 SH2B2O14492 632 aaPredicted RBP9.39□□□□□ -0.91
COPS3-215ENST00000578317 TLL1O43897 1013 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
COPS3-215ENST00000578317 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms