RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 SPTBN5Q9NRC6 3674 aaKnown RBP16.45■□□□□ 0.22
UPF3AP2-202ENST00000578315 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 CYP2D7A0A087X1C5 515 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 PQBP1O60828 265 aaKnown RBP16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 CLTBP09497 229 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 RARBP10826 455 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 LENG1Q96BZ8 264 aaPredicted RBP16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
UPF3AP2-202ENST00000578315 RAD21O60216 631 aa16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 C1orf53Q5VUE5 145 aa16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 RHPN1Q8TCX5 695 aa16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 ZNFX1Q9P2E3 1918 aaKnown RBP16.43■□□□□ 0.22
UPF3AP2-202ENST00000578315 SMCHD1A6NHR9 2005 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 MBD4O95243 580 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 SLC25A27O95847 323 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 EEF2P13639 858 aaKnown RBP16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 RAG1P15918 1043 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 RNF180Q86T96 592 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 MYH8P13535 1937 aa16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 COL11A1P12107 1806 aaPredicted RBP16.42■□□□□ 0.22
UPF3AP2-202ENST00000578315 PARP14Q460N5 1801 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 CHGBP05060 677 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 CDK8P49336 464 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 KCTD2Q14681 263 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 ZNF792Q3KQV3 632 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 TMEM39AQ9NV64 488 aa16.41■□□□□ 0.22
UPF3AP2-202ENST00000578315 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 ZNF865P0CJ78 1059 aaPredicted RBP16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 STAT3P40763 770 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 FPGSQ05932 587 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 GRIN2CQ14957 1233 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 NRBP1Q9UHY1 535 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
UPF3AP2-202ENST00000578315 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 USP17L21D6R901 530 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 VWA5AO00534 786 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 AKR1A1P14550 325 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 FAM83BQ5T0W9 1011 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 C12orf60Q5U649 245 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 CLASRPQ8N2M8 674 aaKnown RBP16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 BOLA2Q9H3K6 86 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 ATP8A2Q9NTI2 1148 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 PLXNA1Q9UIW2 1896 aa16.39■□□□□ 0.21
UPF3AP2-202ENST00000578315 ADD2P35612 726 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 USP38Q8NB14 1042 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 PRDM6Q9NQX0 595 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
UPF3AP2-202ENST00000578315 DCDC2CA8MYV0 355 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 ADAMTS4O75173 837 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 DNAJB2P25686 324 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 ACLYP53396 1101 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 C16orf86Q6ZW13 317 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 STK11IPQ8N1F8 1099 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 KANSL2Q9H9L4 492 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 GOPCQ9HD26 462 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 ZHX1Q9UKY1 873 aaPredicted RBP16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 SYNRGQ9UMZ2 1314 aa16.37■□□□□ 0.21
UPF3AP2-202ENST00000578315 TMEM265A0A087WTH1 108 aa16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 KCNA10Q16322 511 aa16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 PPM1EQ8WY54 764 aa16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 TSEN34Q9BSV6 310 aaKnown RBP16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 RIPK3Q9Y572 518 aa16.36■□□□□ 0.21
UPF3AP2-202ENST00000578315 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
UPF3AP2-202ENST00000578315 SNRNP48Q6IEG0 339 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms