RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
SMARCD2-205ENST00000577686 COBLO75128 1261 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 EEF2P13639 858 aaKnown RBP17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 LRRC41Q15345 812 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 XPNPEP3Q9NQH7 507 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
SMARCD2-205ENST00000577686 PRKAB2O43741 272 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 STAT3P40763 770 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 SNX17Q15036 470 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 TRIM60Q495X7 471 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 ANO1Q5XXA6 986 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 MSL3Q8N5Y2 521 aaKnown RBP17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
SMARCD2-205ENST00000577686 ROBO3Q96MS0 1386 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 AKR1A1P14550 325 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 PHF24Q9UPV7 400 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 TACC3Q9Y6A5 838 aa17.02■□□□□ 0.32
SMARCD2-205ENST00000577686 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 VWA5AO00534 786 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 EVX2Q03828 476 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 SLF1Q9BQI6 1058 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 TEX13BQ9BXU2 312 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 MYH8P13535 1937 aa17.01■□□□□ 0.31
SMARCD2-205ENST00000577686 SZT2Q5T011 3432 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 CYP2D7A0A087X1C5 515 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 GNAT2P19087 354 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 SBK1Q52WX2 424 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 PRAMEF19Q5SWL8 479 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 FAM83BQ5T0W9 1011 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
SMARCD2-205ENST00000577686 CTR9Q6PD62 1173 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 SIAH1Q8IUQ4 282 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 MIER1Q8N108 512 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 BADQ92934 168 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 FERMT2Q96AC1 680 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 DDX11Q96FC9 970 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 PDLIM7Q9NR12 457 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
SMARCD2-205ENST00000577686 ZBED4O75132 1171 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 CLTBP09497 229 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 SMAD3P84022 425 aaKnown RBP16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 ZNF792Q3KQV3 632 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 TSEN34Q9BSV6 310 aaKnown RBP16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 SPC25Q9HBM1 224 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 NYAP2Q9P242 653 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 FAM184BQ9ULE4 1060 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
SMARCD2-205ENST00000577686 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 TMEM265A0A087WTH1 108 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 PGK2P07205 417 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 RAG1P15918 1043 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 TLE2Q04725 743 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 PRPF38AQ8NAV1 312 aaKnown RBP16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 ZNF214Q9UL59 606 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-205ENST00000577686 MROH7Q68CQ1 1323 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 MOXD2PA6NHM9 499 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 DCDC2CA8MYV0 355 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 TDO2P48775 406 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 SHHQ15465 462 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 ZNF444Q8N0Y2 327 aaPredicted RBP16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 KBTBD3Q8NAB2 608 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 APPBP2Q92624 585 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 FAM161BQ96MY7 647 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 NACAP1Q9BZK3 213 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 PUS7LQ9H0K6 701 aaKnown RBP16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 STARD7Q9NQZ5 370 aa16.97■□□□□ 0.31
SMARCD2-205ENST00000577686 RLFQ13129 1914 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 F5H6K3 240 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 PQBP1O60828 265 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 PGK1P00558 417 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 FDX1P10109 184 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 KLRC3Q07444 240 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms