RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 IVNS1ABPQ9Y6Y0 642 aa20.63■□□□□ 0.89
ABR-236ENST00000577052 ZNFX1Q9P2E3 1918 aaKnown RBP20.63■□□□□ 0.89
ABR-236ENST00000577052 SMCHD1A6NHR9 2005 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 TRIM6-TRIM34B2RNG4 842 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 MPHOSPH10O00566 681 aaKnown RBP20.62■□□□□ 0.89
ABR-236ENST00000577052 CDC45O75419 566 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 DSG3P32926 999 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 RTP1P59025 263 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 OLFML2BQ68BL8 750 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 HAUS7Q99871 368 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 ARMT1Q9H993 441 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 MYH8P13535 1937 aa20.62■□□□□ 0.89
ABR-236ENST00000577052 COL11A1P12107 1806 aaPredicted RBP20.62■□□□□ 0.89
ABR-236ENST00000577052 UNC80Q8N2C7 3258 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 CYP2D7A0A087X1C5 515 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 MSCO60682 206 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
ABR-236ENST00000577052 SPICE1Q8N0Z3 855 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 SHCBP1Q8NEM2 672 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 ATG4CQ96DT6 458 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
ABR-236ENST00000577052 TANGO6Q9C0B7 1094 aa20.61■□□□□ 0.89
ABR-236ENST00000577052 TMEM179Q6ZVK1 233 aa20.6■□□□□ 0.89
ABR-236ENST00000577052 DPP9Q86TI2 863 aa20.6■□□□□ 0.89
ABR-236ENST00000577052 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
ABR-236ENST00000577052 HOXC10Q9NYD6 342 aa20.6■□□□□ 0.89
ABR-236ENST00000577052 STRNO43815 780 aa20.59■□□□□ 0.89
ABR-236ENST00000577052 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
ABR-236ENST00000577052 TMX2Q9Y320 296 aa20.59■□□□□ 0.89
ABR-236ENST00000577052 MBD4O95243 580 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 ADD2P35612 726 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 TMEM132BQ14DG7 1078 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 SNX17Q15036 470 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 EVI5LQ96CN4 794 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 VCPKMTQ9H867 229 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 ATP11BQ9Y2G3 1177 aa20.58■□□□□ 0.89
ABR-236ENST00000577052 SEPT4O43236 478 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 FLOT1O75955 427 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 TRIM60Q495X7 471 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 FAM47AQ5JRC9 791 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 C9orf50Q5SZB4 431 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 FAM109BQ6ICB4 259 aaPredicted RBP20.57■□□□□ 0.88
ABR-236ENST00000577052 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 FAM161BQ96MY7 647 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 FBXO28Q9NVF7 368 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 SWAP70Q9UH65 585 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 ADAMTS5Q9UNA0 930 aa20.57■□□□□ 0.88
ABR-236ENST00000577052 CDK8P49336 464 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 ICA1Q05084 483 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 PLS1Q14651 629 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 LRRC41Q15345 812 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 SHHQ15465 462 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 NCAPG2Q86XI2 1143 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 MB21D1Q8N884 522 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 LBHD1Q9BQE6 289 aaPredicted RBP20.56■□□□□ 0.88
ABR-236ENST00000577052 PAG1Q9NWQ8 432 aa20.56■□□□□ 0.88
ABR-236ENST00000577052 MYH7P12883 1935 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 TRIM43BA6NCK2 446 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 ITGB8P26012 769 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 ADCYAP1R1P41586 468 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 ABRAQ8N0Z2 381 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 ARRDC4Q8NCT1 418 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 TRIM43Q96BQ3 446 aaPredicted RBP20.55■□□□□ 0.88
ABR-236ENST00000577052 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.55■□□□□ 0.88
ABR-236ENST00000577052 MROH8Q9H579 483 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 PDLIM7Q9NR12 457 aa20.55■□□□□ 0.88
ABR-236ENST00000577052 GREB1LQ9C091 1923 aaPredicted RBP20.55■□□□□ 0.88
ABR-236ENST00000577052 EYSQ5T1H1 3165 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 PLXNA1Q9UIW2 1896 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 USP17L12C9JPN9 530 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 USP17L21D6R901 530 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 SEC24BO95487 1268 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 PGK2P07205 417 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 EEF2P13639 858 aaKnown RBP20.54■□□□□ 0.88
ABR-236ENST00000577052 TAL1P17542 331 aaPredicted RBP20.54■□□□□ 0.88
ABR-236ENST00000577052 CHMLP26374 656 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
ABR-236ENST00000577052 C16orf86Q6ZW13 317 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 REPS2Q8NFH8 660 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 BADQ92934 168 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 FERMT2Q96AC1 680 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 ATP8A2Q9NTI2 1148 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 CDH23Q9H251 3354 aa20.54■□□□□ 0.88
ABR-236ENST00000577052 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
ABR-236ENST00000577052 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
ABR-236ENST00000577052 FSD1Q9BTV5 496 aa20.53■□□□□ 0.88
ABR-236ENST00000577052 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
ABR-236ENST00000577052 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
ABR-236ENST00000577052 KBTBD13C9JR72 458 aa20.52■□□□□ 0.88
ABR-236ENST00000577052 MYCNP04198 464 aaPredicted RBP20.52■□□□□ 0.88
ABR-236ENST00000577052 CTR9Q6PD62 1173 aa20.52■□□□□ 0.88
ABR-236ENST00000577052 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
ABR-236ENST00000577052 PRDM5Q9NQX1 630 aaPredicted RBP20.52■□□□□ 0.88
ABR-236ENST00000577052 FCER1AP12319 257 aa20.51■□□□□ 0.87
ABR-236ENST00000577052 ZNF792Q3KQV3 632 aa20.51■□□□□ 0.87
ABR-236ENST00000577052 C1orf53Q5VUE5 145 aa20.51■□□□□ 0.87
ABR-236ENST00000577052 RIOX2Q8IUF8 465 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms