RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CNMDO75829 334 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 CYP2B6P20813 491 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 RGS2P41220 211 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 SLFN13Q68D06 897 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 PXYLP1Q8TE99 480 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 ESR2Q92731 530 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
SMG6-220ENST00000576218 NMT2O60551 498 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 INHAP05111 366 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 CHMLP26374 656 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 SLC1A4P43007 532 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 GMCL1P1Q8NEA9 526 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 RNF208Q9H0X6 261 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 FBXO28Q9NVF7 368 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 PPP1R9AQ9ULJ8 1098 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 MYH4Q9Y623 1939 aa18.01■□□□□ 0.47
SMG6-220ENST00000576218 POTEFA5A3E0 1075 aa18■□□□□ 0.47
SMG6-220ENST00000576218 HMGCRP04035 888 aa18■□□□□ 0.47
SMG6-220ENST00000576218 CCL5P13501 91 aa18■□□□□ 0.47
SMG6-220ENST00000576218 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
SMG6-220ENST00000576218 SLC4A3P48751 1232 aa18■□□□□ 0.47
SMG6-220ENST00000576218 CCDC96Q2M329 555 aa18■□□□□ 0.47
SMG6-220ENST00000576218 KIAA1211Q6ZU35 1233 aa18■□□□□ 0.47
SMG6-220ENST00000576218 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
SMG6-220ENST00000576218 MKL1Q969V6 931 aa18■□□□□ 0.47
SMG6-220ENST00000576218 KIFC2Q96AC6 838 aa18■□□□□ 0.47
SMG6-220ENST00000576218 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
SMG6-220ENST00000576218 HTTP42858 3142 aa18■□□□□ 0.47
SMG6-220ENST00000576218 ZBED4O75132 1171 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 BMP3P12645 472 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 RGS19P49795 217 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 MTFR1Q15390 333 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
SMG6-220ENST00000576218 APBA2Q99767 749 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 FEM1BQ9UK73 627 aa17.99■□□□□ 0.47
SMG6-220ENST00000576218 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 VWA5AO00534 786 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 ERCC3P19447 782 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 POTEEQ6S8J3 1075 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 CASC1Q6TDU7 716 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 DPP9Q86TI2 863 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
SMG6-220ENST00000576218 SHCBP1Q8NEM2 672 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 MROH8Q9H579 483 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 IL17RBQ9NRM6 502 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 GJD2Q9UKL4 321 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 NEDD4P46934 1319 aa17.98■□□□□ 0.47
SMG6-220ENST00000576218 TMEM232C9JQI7 657 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 SLC25A27O95847 323 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 FGRP09769 529 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 PTPREP23469 700 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 MCCP23508 829 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 COPB2P35606 906 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 STAT2P52630 851 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 TRDNQ13061 729 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 MAP2K5Q13163 448 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 TMEM132BQ14DG7 1078 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 KRT23Q9C075 422 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
SMG6-220ENST00000576218 A0A0G2JMZ2 1700 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 STRNO43815 780 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 KDM4AO75164 1064 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 TOP1P11387 765 aaKnown RBP17.96■□□□□ 0.47
SMG6-220ENST00000576218 EN2P19622 333 aaPredicted RBP17.96■□□□□ 0.47
SMG6-220ENST00000576218 STAT3P40763 770 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 NT5C2P49902 561 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 MORN1Q5T089 497 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
SMG6-220ENST00000576218 FAM160B2Q86V87 743 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 SKAP1Q86WV1 359 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 TRIB2Q92519 343 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 GMCL1Q96IK5 515 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 ZKSCAN3Q9BRR0 538 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 IL25Q9H293 177 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 U3KPZ7 1027 aaPredicted RBP17.96■□□□□ 0.47
SMG6-220ENST00000576218 DOCK3Q8IZD9 2030 aa17.96■□□□□ 0.47
SMG6-220ENST00000576218 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 B4E1Z4 1266 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 SGSM2O43147 1006 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 FCER1AP12319 257 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
SMG6-220ENST00000576218 ADORA2AP29274 412 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 KCTD2Q14681 263 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 MFSD14CQ5VZR4 134 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 KCTD1Q719H9 257 aa17.95■□□□□ 0.46
SMG6-220ENST00000576218 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms