RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 PDAP1Q13442 181 aaKnown RBP16.8■□□□□ 0.28
CDC27-217ENST00000575483 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 MFSD14CQ5VZR4 134 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 SHCBP1Q8NEM2 672 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 SPATC1LQ9H0A9 340 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
CDC27-217ENST00000575483 TRPC6Q9Y210 931 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 CDH23Q9H251 3354 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 SMCHD1A6NHR9 2005 aa16.8■□□□□ 0.28
CDC27-217ENST00000575483 ADORA2AP29274 412 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 LRIT3Q3SXY7 679 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 WDR78Q5VTH9 848 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 LPAR1Q92633 364 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 HOXC10Q9NYD6 342 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 IVNS1ABPQ9Y6Y0 642 aa16.79■□□□□ 0.28
CDC27-217ENST00000575483 COBLO75128 1261 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 ERCC3P19447 782 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 CDK8P49336 464 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 OLFML2BQ68BL8 750 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 GPR153Q6NV75 609 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDC27-217ENST00000575483 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
CDC27-217ENST00000575483 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
CDC27-217ENST00000575483 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 USP17L21D6R901 530 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 STRNO43815 780 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 MSCO60682 206 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 ICA1Q05084 483 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 TDHQ8IZJ6 230 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 CCDC17Q96LX7 622 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 PUS7LQ9H0K6 701 aaKnown RBP16.77■□□□□ 0.28
CDC27-217ENST00000575483 RCAN3Q9UKA8 241 aa16.77■□□□□ 0.28
CDC27-217ENST00000575483 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.27
CDC27-217ENST00000575483 DNM1LO00429 736 aa16.76■□□□□ 0.27
CDC27-217ENST00000575483 PSEN1P49768 467 aa16.76■□□□□ 0.27
CDC27-217ENST00000575483 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
CDC27-217ENST00000575483 ABRAQ8N0Z2 381 aa16.76■□□□□ 0.27
CDC27-217ENST00000575483 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDC27-217ENST00000575483 MYH4Q9Y623 1939 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
CDC27-217ENST00000575483 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
CDC27-217ENST00000575483 FLOT1O75955 427 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
CDC27-217ENST00000575483 TMEM132BQ14DG7 1078 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 MROH8Q9H579 483 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 ARHGEF10LQ9HCE6 1279 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
CDC27-217ENST00000575483 VCANP13611 3396 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 REPS2Q8NFH8 660 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 STRBPQ96SI9 672 aaKnown RBP16.74■□□□□ 0.27
CDC27-217ENST00000575483 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
CDC27-217ENST00000575483 SENP6Q9GZR1 1112 aaPredicted RBP16.74■□□□□ 0.27
CDC27-217ENST00000575483 SH2D4AQ9H788 454 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 FBXO28Q9NVF7 368 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
CDC27-217ENST00000575483 SEPT4O43236 478 aa16.73■□□□□ 0.27
CDC27-217ENST00000575483 CNGA1P29973 690 aa16.73■□□□□ 0.27
CDC27-217ENST00000575483 MAML3Q96JK9 1138 aa16.73■□□□□ 0.27
CDC27-217ENST00000575483 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
CDC27-217ENST00000575483 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
CDC27-217ENST00000575483 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
CDC27-217ENST00000575483 ZNF214Q9UL59 606 aaPredicted RBP16.73■□□□□ 0.27
CDC27-217ENST00000575483 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 MDM2Q00987 491 aaPredicted RBP16.72■□□□□ 0.27
CDC27-217ENST00000575483 SNX17Q15036 470 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 SBK1Q52WX2 424 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
CDC27-217ENST00000575483 ASTLQ6HA08 431 aaPredicted RBP16.72■□□□□ 0.27
CDC27-217ENST00000575483 Q7L0L9 218 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
CDC27-217ENST00000575483 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
CDC27-217ENST00000575483 VWA5AO00534 786 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 RASA1P20936 1047 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 ATN1P54259 1190 aaPredicted RBP16.71■□□□□ 0.27
CDC27-217ENST00000575483 PLS1Q14651 629 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 PRAMEF19Q5SWL8 479 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 ANO1Q5XXA6 986 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 NCAPG2Q86XI2 1143 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 RIOX2Q8IUF8 465 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 OSBP2Q969R2 916 aa16.71■□□□□ 0.27
CDC27-217ENST00000575483 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
CDC27-217ENST00000575483 MCM3APO60318 1980 aa16.7■□□□□ 0.26
CDC27-217ENST00000575483 IGKV6D-41A0A0C4DH26 115 aa16.7■□□□□ 0.26
CDC27-217ENST00000575483 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
CDC27-217ENST00000575483 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
CDC27-217ENST00000575483 SLC25A27O95847 323 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms