RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 PHF24Q9UPV7 400 aa25.09■■□□□ 1.61
SPNS3-203ENST00000575185 PGK1P00558 417 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 PGK2P07205 417 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 FCER1AP12319 257 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 FOSL2P15408 326 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 ICA1Q05084 483 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 SLFNL1Q499Z3 407 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 VCPKMTQ9H867 229 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 ARMT1Q9H993 441 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 TMX2Q9Y320 296 aa25.08■■□□□ 1.61
SPNS3-203ENST00000575185 GOLIM4O00461 696 aa25.07■■□□□ 1.6
SPNS3-203ENST00000575185 TAL1P17542 331 aaPredicted RBP25.07■■□□□ 1.6
SPNS3-203ENST00000575185 TTF1Q15361 905 aaPredicted RBP25.07■■□□□ 1.6
SPNS3-203ENST00000575185 YTHDC1Q96MU7 727 aaKnown RBP25.07■■□□□ 1.6
SPNS3-203ENST00000575185 DNAJC2Q99543 621 aaKnown RBP25.07■■□□□ 1.6
SPNS3-203ENST00000575185 ARHGEF10LQ9HCE6 1279 aa25.07■■□□□ 1.6
SPNS3-203ENST00000575185 FBXO28Q9NVF7 368 aa25.07■■□□□ 1.6
SPNS3-203ENST00000575185 MYH7P12883 1935 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 CYP2D7A0A087X1C5 515 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 PRKAB2O43741 272 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 CLTBP09497 229 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 RARBP10826 455 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 ERC1Q8IUD2 1116 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 RNPC3Q96LT9 517 aaKnown RBP25.06■■□□□ 1.6
SPNS3-203ENST00000575185 MMP19Q99542 508 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 SWAP70Q9UH65 585 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 TTC28Q96AY4 2481 aa25.06■■□□□ 1.6
SPNS3-203ENST00000575185 PQBP1O60828 265 aaKnown RBP25.05■■□□□ 1.6
SPNS3-203ENST00000575185 A0A1W2PQ45 241 aaPredicted RBP25.04■■□□□ 1.6
SPNS3-203ENST00000575185 A0A1W2PQY0 241 aa25.04■■□□□ 1.6
SPNS3-203ENST00000575185 WDR46O15213 610 aaKnown RBP25.04■■□□□ 1.6
SPNS3-203ENST00000575185 RHPN1Q8TCX5 695 aa25.04■■□□□ 1.6
SPNS3-203ENST00000575185 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
SPNS3-203ENST00000575185 TACC3Q9Y6A5 838 aa25.04■■□□□ 1.6
SPNS3-203ENST00000575185 ROBO3Q96MS0 1386 aa25.04■■□□□ 1.6
SPNS3-203ENST00000575185 APBB1O00213 710 aa25.03■■□□□ 1.6
SPNS3-203ENST00000575185 TINF2Q9BSI4 451 aa25.03■■□□□ 1.6
SPNS3-203ENST00000575185 SH2D4AQ9H788 454 aa25.03■■□□□ 1.6
SPNS3-203ENST00000575185 GREB1LQ9C091 1923 aaPredicted RBP25.02■■□□□ 1.6
SPNS3-203ENST00000575185 KIAA0355O15063 1070 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 MBD4O95243 580 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 SLC25A27O95847 323 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 CHGBP05060 677 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 ZNF865P0CJ78 1059 aaPredicted RBP25.02■■□□□ 1.6
SPNS3-203ENST00000575185 RAG1P15918 1043 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 ZNF792Q3KQV3 632 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 RNF180Q86T96 592 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 ADAMTS5Q9UNA0 930 aa25.02■■□□□ 1.6
SPNS3-203ENST00000575185 EEF2P13639 858 aaKnown RBP25.01■■□□□ 1.59
SPNS3-203ENST00000575185 RIOX2Q8IUF8 465 aa25.01■■□□□ 1.59
SPNS3-203ENST00000575185 USP38Q8NB14 1042 aa25.01■■□□□ 1.59
SPNS3-203ENST00000575185 NRBP1Q9UHY1 535 aa25.01■■□□□ 1.59
SPNS3-203ENST00000575185 MCM3APO60318 1980 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 ADAMTS4O75173 837 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 CDK8P49336 464 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 FPGSQ05932 587 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 KCTD2Q14681 263 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 GRIN2CQ14957 1233 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 TMEM39AQ9NV64 488 aa25■■□□□ 1.59
SPNS3-203ENST00000575185 ZNF214Q9UL59 606 aaPredicted RBP25■■□□□ 1.59
SPNS3-203ENST00000575185 CHD9Q3L8U1 2897 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 VWA5AO00534 786 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 FAAP100Q0VG06 881 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 C12orf60Q5U649 245 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 REPS2Q8NFH8 660 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.99■■□□□ 1.59
SPNS3-203ENST00000575185 PRDM6Q9NQX0 595 aa24.99■■□□□ 1.59
SPNS3-203ENST00000575185 SYNRGQ9UMZ2 1314 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 TMEM265A0A087WTH1 108 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 RAD21O60216 631 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 AKR1A1P14550 325 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 DNAJB2P25686 324 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 ADD2P35612 726 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 STAT3P40763 770 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 FAM83BQ5T0W9 1011 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 PANK1Q8TE04 598 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 ATP8A2Q9NTI2 1148 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 PPP1R9AQ9ULJ8 1098 aa24.98■■□□□ 1.59
SPNS3-203ENST00000575185 USP17L12C9JPN9 530 aa24.97■■□□□ 1.59
SPNS3-203ENST00000575185 USP17L21D6R901 530 aa24.97■■□□□ 1.59
SPNS3-203ENST00000575185 IRX5P78411 483 aaPredicted RBP24.97■■□□□ 1.59
SPNS3-203ENST00000575185 C16orf86Q6ZW13 317 aa24.97■■□□□ 1.59
SPNS3-203ENST00000575185 CLASRPQ8N2M8 674 aaKnown RBP24.97■■□□□ 1.59
SPNS3-203ENST00000575185 CCDC17Q96LX7 622 aa24.97■■□□□ 1.59
SPNS3-203ENST00000575185 DIS3Q9Y2L1 958 aaKnown RBP24.97■■□□□ 1.59
SPNS3-203ENST00000575185 MYADML2A6NDP7 307 aa24.96■■□□□ 1.59
SPNS3-203ENST00000575185 IFIT2P09913 472 aaKnown RBP24.96■■□□□ 1.59
SPNS3-203ENST00000575185 ACLYP53396 1101 aa24.96■■□□□ 1.59
SPNS3-203ENST00000575185 HSP90AB4PQ58FF6 505 aa24.96■■□□□ 1.59
SPNS3-203ENST00000575185 NUP88Q99567 741 aaPredicted RBP24.96■■□□□ 1.59
SPNS3-203ENST00000575185 STARD7Q9NQZ5 370 aa24.96■■□□□ 1.59
SPNS3-203ENST00000575185 PAG1Q9NWQ8 432 aa24.96■■□□□ 1.59
SPNS3-203ENST00000575185 MYH4Q9Y623 1939 aa24.95■■□□□ 1.58
SPNS3-203ENST00000575185 ANKRD33Q7Z3H0 272 aa24.95■■□□□ 1.58
SPNS3-203ENST00000575185 BOLA2Q9H3K6 86 aa24.95■■□□□ 1.58
SPNS3-203ENST00000575185 CNPY2Q9Y2B0 182 aa24.95■■□□□ 1.58
SPNS3-203ENST00000575185 GBF1Q92538 1859 aa24.94■■□□□ 1.58
SPNS3-203ENST00000575185 KIF1BPQ96EK5 621 aa24.94■■□□□ 1.58
SPNS3-203ENST00000575185 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.94■■□□□ 1.58
SPNS3-203ENST00000575185 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms