RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 OFD1O75665 1012 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 TPM2P07951 284 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 PTGDRQ13258 359 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 STK32BQ9NY57 414 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 MCM7P33993 719 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 HOMER1Q86YM7 354 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
USP43-205ENST00000574408 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 EPSTI1Q96J88 318 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 BPIFA3Q9BQP9 254 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 PDCL3Q9H2J4 239 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 SH3GLB2Q9NR46 395 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 AKR1B1P15121 316 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 CRKP46108 304 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 GABPAQ06546 454 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 POSTNQ15063 836 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 APOBEC3HQ6NTF7 200 aaKnown RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 CCDC148Q8NFR7 591 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 SERPINB13Q9UIV8 391 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 VWA3AA6NCI4 1184 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 TRAPPC10P48553 1259 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 NFIAQ12857 509 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 DHX58Q96C10 678 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
USP43-205ENST00000574408 OSBPL5Q9H0X9 879 aaPredicted RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 MORC2Q9Y6X9 1032 aaPredicted RBP11.94□□□□□ -0.5
USP43-205ENST00000574408 ECE2O60344 883 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 RBM5P52756 815 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP43-205ENST00000574408 ATP2C1P98194 919 aaPredicted RBP11.93□□□□□ -0.5
USP43-205ENST00000574408 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 LRRC47Q8N1G4 583 aaKnown RBP11.93□□□□□ -0.5
USP43-205ENST00000574408 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 VAT1LQ9HCJ6 419 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 CCDC194A0A1B0GVG4 234 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 USP17L5A8MUK1 530 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 CDC25BP30305 580 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 TPM4P67936 248 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 MDM2Q00987 491 aaPredicted RBP11.93□□□□□ -0.5
USP43-205ENST00000574408 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 BARHL2Q9NY43 387 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 MTMR4Q9NYA4 1195 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 PYCARDQ9ULZ3 195 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 PCDHAC2Q9Y5I4 1007 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 SMTNL1A8MU46 457 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 STXBP3O00186 592 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
USP43-205ENST00000574408 CACNB3P54284 484 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
USP43-205ENST00000574408 SLX4Q8IY92 1834 aa11.93□□□□□ -0.5
USP43-205ENST00000574408 A0A087X0B3 334 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 HLA-DOAP06340 250 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 NAPAP54920 295 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 NCAPHQ15003 741 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 ELOA2Q8IYF1 753 aaPredicted RBP11.92□□□□□ -0.5
USP43-205ENST00000574408 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 SLURP2P0DP57 97 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
USP43-205ENST00000574408 LRMPQ12912 555 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 AOC3Q16853 763 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 CCDC144BQ3MJ40 725 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 SMARCE1Q969G3 411 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
USP43-205ENST00000574408 UBA5Q9GZZ9 404 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
USP43-205ENST00000574408 SWAP70Q9UH65 585 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
USP43-205ENST00000574408 FOCADQ5VW36 1801 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 SMC2O95347 1197 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 TCP10Q12799 353 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 NOLC1Q14978 699 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP43-205ENST00000574408 DACT2Q5SW24 774 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 PLIN4Q96Q06 1357 aa11.92□□□□□ -0.5
USP43-205ENST00000574408 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
USP43-205ENST00000574408 PDHBP11177 359 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 SHMT1P34896 483 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 NOVP48745 357 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 ATP2B2Q01814 1243 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 ZFPM1Q8IX07 1006 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 CCDC34Q96HJ3 373 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 ZDHHC15Q96MV8 337 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 PIGSQ96S52 555 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 IKBKBO14920 756 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms