RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
RPAIN-214ENST00000574003 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-214ENST00000574003 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
RPAIN-214ENST00000574003 EVI5LQ96CN4 794 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 CLIP2Q9UDT6 1046 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
RPAIN-214ENST00000574003 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 NDUFB10O96000 172 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 ADORA2AP29274 412 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 CYP2C19P33261 490 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-214ENST00000574003 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 RILPL2Q969X0 211 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 NACAP1Q9BZK3 213 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 RWDD1Q9H446 243 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-214ENST00000574003 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-214ENST00000574003 IVNS1ABPQ9Y6Y0 642 aa13.5□□□□□ -0.25
RPAIN-214ENST00000574003 ZNFX1Q9P2E3 1918 aaKnown RBP13.5□□□□□ -0.25
RPAIN-214ENST00000574003 F5H6K3 240 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 NMT2O60551 498 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 SLC34A2O95436 690 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 TFAP4Q01664 338 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 KLRC3Q07444 240 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-214ENST00000574003 RASGRP2Q7LDG7 609 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 CHD1LQ86WJ1 897 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 MTMR4Q9NYA4 1195 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
RPAIN-214ENST00000574003 VWA5AO00534 786 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 NUCB1Q02818 461 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
RPAIN-214ENST00000574003 PRAMEF19Q5SWL8 479 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 DPP9Q86TI2 863 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 MB21D1Q8N884 522 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 HTATIP2Q9BUP3 242 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 OGDHLQ9ULD0 1010 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 ADAMTS5Q9UNA0 930 aa13.48□□□□□ -0.25
RPAIN-214ENST00000574003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPAIN-214ENST00000574003 PGK2P07205 417 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 HOXC6P09630 235 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 CNGA1P29973 690 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 PDE4BQ07343 736 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 LHX8Q68G74 356 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 NECAB2Q7Z6G3 386 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
RPAIN-214ENST00000574003 SHCBP1Q8NEM2 672 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 ZNF214Q9UL59 606 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-214ENST00000574003 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 RIPK3Q9Y572 518 aa13.47□□□□□ -0.25
RPAIN-214ENST00000574003 IGHA2P01877 340 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 STAT3P40763 770 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 HAND2P61296 217 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 AAMPQ13685 434 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 SLFN13Q68D06 897 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 RIOX2Q8IUF8 465 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
RPAIN-214ENST00000574003 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
RPAIN-214ENST00000574003 FRMPD3Q5JV73 1810 aa13.46□□□□□ -0.26
RPAIN-214ENST00000574003 SMCHD1A6NHR9 2005 aa13.46□□□□□ -0.26
RPAIN-214ENST00000574003 PFASO15067 1338 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 EVI5O60447 810 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 RANBP6O60518 1105 aaKnown RBP13.45□□□□□ -0.26
RPAIN-214ENST00000574003 TTLL1O95922 423 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 FGAP02671 866 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 SLC3A2P08195 630 aaKnown RBP13.45□□□□□ -0.26
RPAIN-214ENST00000574003 SDSP20132 328 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 PDE4AP27815 886 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 SNAP25P60880 206 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 RRP12Q5JTH9 1297 aaKnown RBP13.45□□□□□ -0.26
RPAIN-214ENST00000574003 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 MKL1Q969V6 931 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 MMP19Q99542 508 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 MROH8Q9H579 483 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 C11orf49Q9H6J7 331 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
RPAIN-214ENST00000574003 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-214ENST00000574003 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
RPAIN-214ENST00000574003 CCDC171Q6TFL3 1326 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 ZNF236Q9UL36 1845 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms