RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 C11orf49Q9H6J7 331 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 SLC5A4Q9NY91 659 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 COLQQ9Y215 455 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 MCM3APO60318 1980 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 STRNO43815 780 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 PDE1AP54750 535 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 AAMPQ13685 434 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 NPLOC4Q8TAT6 608 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 NUP88Q99567 741 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 MROH8Q9H579 483 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 FLRT1Q9NZU1 646 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 CLIP2Q9UDT6 1046 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 OGDHLQ9ULD0 1010 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 SALL3Q9BXA9 1300 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 LAMA4Q16363 1823 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
NPLOC4-212ENST00000573328 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 SLC25A27O95847 323 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 HOXC6P09630 235 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 FCER1AP12319 257 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 CYP2C19P33261 490 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 PPARAQ07869 468 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
NPLOC4-212ENST00000573328 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 F5H6K3 240 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 VWA5AO00534 786 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 TTLL1O95922 423 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 NDUFB10O96000 172 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 KLRC3Q07444 240 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 RILPL2Q969X0 211 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 CEP95Q96GE4 821 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 MMP19Q99542 508 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 STAP2Q9UGK3 403 aa11.47□□□□□ -0.57
NPLOC4-212ENST00000573328 TSPY2A6NKD2 308 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 MSCO60682 206 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 COPB2P35606 906 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 STAT3P40763 770 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 TFAP4Q01664 338 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 CTDSPL2Q05D32 466 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 KCTD2Q14681 263 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 RIOX2Q8IUF8 465 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 EXOC6Q8TAG9 804 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-212ENST00000573328 PFASO15067 1338 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 A0A0D9SFI3 127 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 RANBP6O60518 1105 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 COBLO75128 1261 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 ZBED4O75132 1171 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 PGK2P07205 417 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 CYBAP13498 195 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 VPS53Q5VIR6 699 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 LHX8Q68G74 356 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 CPXCR1Q8N123 301 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 NEDD1Q8NHV4 660 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 FAM227BQ96M60 508 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 TEX13BQ9BXU2 312 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 STX8Q9UNK0 236 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 MYH6P13533 1939 aa11.45□□□□□ -0.58
NPLOC4-212ENST00000573328 KBTBD13C9JR72 458 aa11.44□□□□□ -0.58
NPLOC4-212ENST00000573328 BMP3P12645 472 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms