RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CNGA1P29973 690 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 ZNF165P49910 485 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 BTG3Q14201 252 aaPredicted RBP11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 FUKQ8N0W3 1084 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 CCHCR1Q8TD31 782 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 CAPS2Q9BXY5 557 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 DDX19AQ9NUU7 478 aaKnown RBP11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 AATFQ9NY61 560 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 ZFATQ9P243 1243 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 RABL2AQ9UBK7 228 aaPredicted RBP11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 N6AMT1Q9Y5N5 214 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
CHRNB1-205ENST00000573209 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 MCM3P25205 808 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 KRT32Q14532 448 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 CRELD2Q6UXH1 353 aaPredicted RBP11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 TTC6Q86TZ1 520 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 CEP57L1Q8IYX8 460 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 ABLIM1O14639 778 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 TRIM21P19474 475 aaKnown RBP11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 GNAQP50148 359 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 GALNT17Q6IS24 598 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 ANKRD13BQ86YJ7 626 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 TBC1D31Q96DN5 1066 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 UBAP1Q9NZ09 502 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 ATXN10Q9UBB4 475 aa11.72□□□□□ -0.53
CHRNB1-205ENST00000573209 ALOX15P16050 662 aaPredicted RBP11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 ALDH3A1P30838 453 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 RBM43Q6ZSC3 357 aaKnown RBP11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 FAM227BQ96M60 508 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 ABCB6Q9NP58 842 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 TMCO1Q9UM00 188 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 BZW2Q9Y6E2 419 aaKnown RBP11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
CHRNB1-205ENST00000573209 RASSF10A6NK89 507 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 TMEM232C9JQI7 657 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 SYF2O95926 243 aaKnown RBP11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 ABL2P42684 1182 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 PROSER3Q2NL68 480 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 CWF19L2Q2TBE0 894 aaKnown RBP11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 HOOK3Q86VS8 718 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 NECAB1Q8N987 351 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 ZBTB8BQ8NAP8 495 aaPredicted RBP11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 SMARCC2Q8TAQ2 1214 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 IWS1Q96ST2 819 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 COL15A1P39059 1388 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 SPEF2Q9C093 1822 aa11.71□□□□□ -0.54
CHRNB1-205ENST00000573209 A0A0D9SFI3 127 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 A0A1B0GVG6 124 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 NDUFAB1O14561 156 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PHEXP78562 749 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 NSUN2Q08J23 767 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 WHAMMP3Q1A5X7 153 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 ACCSLQ4AC99 568 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 TTC30AQ86WT1 665 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 TNMDQ9H2S6 317 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 GALNT8Q9NY28 637 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 EIF3FO00303 357 aaPredicted RBP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 NPTXRO95502 500 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 IDO1P14902 403 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 KCNA2P16389 499 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 SFPQP23246 707 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PSMC4P43686 418 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 MYO1EQ12965 1108 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PROSER2Q86WR7 435 aaPredicted RBP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 MAIP1Q8WWC4 291 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PPP1R14BQ96C90 147 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
CHRNB1-205ENST00000573209 LRRD1A4D1F6 860 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 GOLGA6L4A6NEF3 574 aa11.69□□□□□ -0.54
CHRNB1-205ENST00000573209 TMCC1O94876 653 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms